Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU processome.pre-40S ribosomal subunit nuclear assembly.UtpA module.assembly factor (UTP4/PCN)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group28 1 CH_ach_112 2 2 0.000162964
Daucus carota DCARv2_S511 1 CH_dca_415 2 2 0.000637775
Davidia involucrata GWHABJS00000011 1 CH_din_315 2 2 0.000150038
Erigeron canadensis Conyza_canadensis_scaffold:7 1 CH_eca_322 2 3 0.000134614
Helianthus annuus HanXRQChr10 1 CH_han_488 2 2 0.000115929
Sequoiadendron giganteum chr10 1 CH_sgi_716 2 2 0.0000487151
Trochodendron aralioides group14 1 CH_tar_97 3 3 0.000000021627
Actinidia chinensis Lachesis_group28 2 CH_ach_112 2 2 0.000162964
Daucus carota DCARv2_S511 2 CH_dca_415 2 2 0.000637775
Davidia involucrata GWHABJS00000011 2 CH_din_315 2 2 0.000150038
Erigeron canadensis Conyza_canadensis_scaffold:7 2 CH_eca_322 2 3 0.000134614
Helianthus annuus HanXRQChr10 2 CH_han_488 2 2 0.000115929
Sequoiadendron giganteum chr10 2 CH_sgi_716 2 2 0.0000487151
Trochodendron aralioides group14 2 CH_tar_97 3 3 0.000000021627

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001