Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU processome.pre-40S ribosomal subunit nuclear assembly.assembly factor (NOC4)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_228 1 CH_aag_66 3 29 0.0000352686
Brassica carinata ChrB07 1 CH_bca_1035 2 3 0.000641272
Camellia sinensis var. sinensis Chr12 1 CH_camsi_336 3 8 0.000000706367
Sequoiadendron giganteum chr5 1 CH_sgi_1063 2 2 0.000146145
Anthoceros agrestis Sc2ySwM_228 2 CH_aag_66 3 29 0.0000352686
Brassica carinata ChrB07 2 CH_bca_1035 2 3 0.000641272
Camellia sinensis var. sinensis Chr12 2 CH_camsi_336 3 8 0.000000706367
Sequoiadendron giganteum chr5 2 CH_sgi_1063 2 2 0.000146145

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001