Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU processome.pre-40S ribosomal subunit nuclear assembly.MPP10 module.assembly factor (Mpp10)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group9 1 CH_ach_81 2 2 0.0000543213
Camellia sinensis var. sinensis Chr15 1 CH_camsi_851 2 6 0.000687758
Capsicum annuum PGAv.1.6.scaffold1166 1 CH_can_248 2 2 0.0000826105
Magnolia biondii Chr16 1 CH_mbi_652 2 4 0.000874119
Punica granatum NC_045134.1 1 CH_pgr_256 2 3 0.000225098
Pisum sativum chr4LG4 1 CH_psa_261 2 3 0.000156486
Sequoiadendron giganteum chr9 1 CH_sgi_1006 2 3 0.000146142
Actinidia chinensis Lachesis_group9 2 CH_ach_81 2 2 0.0000543213
Camellia sinensis var. sinensis Chr15 2 CH_camsi_851 2 6 0.000687758
Capsicum annuum PGAv.1.6.scaffold1166 2 CH_can_248 2 2 0.0000826105
Magnolia biondii Chr16 2 CH_mbi_652 2 4 0.000874119
Punica granatum NC_045134.1 2 CH_pgr_256 2 3 0.000225098
Pisum sativum chr4LG4 2 CH_psa_261 2 3 0.000156486
Sequoiadendron giganteum chr9 2 CH_sgi_1006 2 3 0.000146142

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001