Functional clusters
Information
- Type MapMan
- Description Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU processome.pre-40S ribosomal subunit nuclear assembly.MPP10 module.assembly factor (Imp3)
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Brassica carinata | Contig324 | 1 | CH_bca_771 | 2 | 2 | 0.000213764 |
Camellia sinensis var. sinensis | Chr2 | 1 | CH_camsi_953 | 2 | 7 | 0.000962839 |
Gossypium raimondii | Chr07 | 1 | CH_gra_166 | 3 | 7 | 0.000000603465 |
Lonicera japonica | GWHAAZE00000081 | 1 | CH_lonja_434 | 2 | 3 | 0.000179657 |
Magnolia biondii | Chr15 | 1 | CH_mbi_629 | 2 | 6 | 0.000728421 |
Brassica carinata | Contig324 | 2 | CH_bca_771 | 2 | 2 | 0.000213764 |
Camellia sinensis var. sinensis | Chr2 | 2 | CH_camsi_953 | 2 | 7 | 0.000962839 |
Gossypium raimondii | Chr07 | 2 | CH_gra_166 | 3 | 7 | 0.000000603465 |
Lonicera japonica | GWHAAZE00000081 | 2 | CH_lonja_434 | 2 | 3 | 0.000179657 |
Magnolia biondii | Chr15 | 2 | CH_mbi_629 | 2 | 6 | 0.000728421 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |