Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.associated component RACK1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group2 1 CH_ach_130 2 2 0.000162964
Avicennia marina ScioBoG_102837_HRSCAF_103074 1 CH_ama_87 2 2 0.000258665
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 1 CH_arhy_496 2 2 0.00017963
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 1 CH_arhy_672 2 3 0.000538871
Cannabis sativa NC_044372.1 1 CH_cansat_390 2 6 0.000984834
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_318 2 2 0.000278772
Actinidia chinensis Lachesis_group2 2 CH_ach_130 2 2 0.000162964
Avicennia marina ScioBoG_102837_HRSCAF_103074 2 CH_ama_87 2 2 0.000258665
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 2 CH_arhy_496 2 2 0.00017963
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 2 CH_arhy_672 2 3 0.000538871
Cannabis sativa NC_044372.1 2 CH_cansat_390 2 6 0.000984834
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_318 2 2 0.000278772

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001