Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS27

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_368 1 CH_aag_153 2 4 0.000481502
Aethionema arabicum LG-3 1 CH_aar_233 2 2 0.000547395
Arabidopsis lyrata scaffold_5 1 CH_aly_302 2 2 0.000198013
Arabidopsis thaliana Chr3 1 CH_ath_307 2 2 0.000171895
Camellia sinensis var. sinensis Chr4 1 CH_camsi_536 2 2 0.0000458547
Citrus clementina scaffold_2 1 CH_ccl_67 4 7 0.0000000000579595
Glycine max Gm02 1 CH_gma_503 2 2 0.000379557
Magnolia biondii Chr07 1 CH_mbi_555 2 3 0.000437077
Salvia bowleyana GWHASIU00000006 1 CH_sbo_122 4 13 0.0000000141305
Solanum lycopersicum SL4.0ch01 1 CH_sly_543 2 2 0.000880411
Anthoceros agrestis Sc2ySwM_368 2 CH_aag_153 2 4 0.000481502
Aethionema arabicum LG-3 2 CH_aar_233 2 2 0.000547395
Arabidopsis lyrata scaffold_5 2 CH_aly_302 2 2 0.000198013
Arabidopsis thaliana Chr3 2 CH_ath_307 2 2 0.000171895
Camellia sinensis var. sinensis Chr4 2 CH_camsi_536 2 2 0.0000458547
Citrus clementina scaffold_2 2 CH_ccl_67 4 7 0.0000000000579595
Glycine max Gm02 2 CH_gma_503 2 2 0.000379557
Magnolia biondii Chr07 2 CH_mbi_555 2 3 0.000437077
Salvia bowleyana GWHASIU00000006 2 CH_sbo_122 4 13 0.0000000141305
Solanum lycopersicum SL4.0ch01 2 CH_sly_543 2 2 0.000880411

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001