Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS24

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrB04 1 CH_bca_984 2 2 0.00059854
Camellia sinensis var. sinensis Chr3 1 CH_camsi_975 2 2 0.000962949
Corylus avellana 2 1 CH_cav_348 2 2 0.000230008
Manihot esculenta Chromosome09 1 CH_mes_454 2 2 0.000610631
Olea europaea chr12 1 CH_oeu_371 2 2 0.000533789
Physcomitrium patens Chr04 1 CH_ppa_326 2 2 0.000919089
Simmondsia chinensis GWHAASQ00000017 1 CH_sci_215 2 2 0.000255428
Vaccinium macrocarpon chr9_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_229 2 2 0.0000929238
Brassica carinata ChrB04 2 CH_bca_984 2 2 0.00059854
Camellia sinensis var. sinensis Chr3 2 CH_camsi_975 2 2 0.000962949
Corylus avellana 2 2 CH_cav_348 2 2 0.000230008
Manihot esculenta Chromosome09 2 CH_mes_454 2 2 0.000610631
Olea europaea chr12 2 CH_oeu_371 2 2 0.000533789
Physcomitrium patens Chr04 2 CH_ppa_326 2 2 0.000919089
Simmondsia chinensis GWHAASQ00000017 2 CH_sci_215 2 2 0.000255428
Vaccinium macrocarpon chr9_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_229 2 2 0.0000929238

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001