Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS15

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_6 1 CH_aly_106 3 3 0.0000000653509
Arabidopsis thaliana Chr5 1 CH_ath_144 3 4 0.000000172356
Brassica carinata ChrC03 1 CH_bca_1152 2 2 0.000961939
Brassica carinata ChrB05 1 CH_bca_1153 2 2 0.000961939
Brassica oleracea C2 1 CH_bol_406 2 2 0.000686409
Cannabis sativa NC_044376.1 1 CH_cansat_288 2 2 0.000196993
Cardamine hirsuta Chr6 1 CH_chi_126 3 3 0.000000143334
Capsella rubella scaffold_6 1 CH_cru_151 3 3 0.000000280668
Eutrema salsugineum scaffold_2 1 CH_esa_87 3 3 0.000000173971
Helianthus annuus HanXRQChr03 1 CH_han_37 7 27 7.67323e-17
Sechium edule LG04 1 CH_sed_251 2 2 0.000214026
Selenicereus undatus Scaffold_10417 1 CH_sun_273 2 2 0.000726639
Selenicereus undatus Scaffold_10417 1 CH_sun_274 2 2 0.000726639
Zea mays 2 1 CH_zma_240 2 4 0.000460162
Arabidopsis lyrata scaffold_6 2 CH_aly_106 3 3 0.0000000653509
Arabidopsis thaliana Chr5 2 CH_ath_144 3 4 0.000000172356
Brassica carinata ChrC03 2 CH_bca_1152 2 2 0.000961939
Brassica carinata ChrB05 2 CH_bca_1153 2 2 0.000961939
Brassica oleracea C2 2 CH_bol_406 2 2 0.000686409
Cannabis sativa NC_044376.1 2 CH_cansat_288 2 2 0.000196993
Cardamine hirsuta Chr6 2 CH_chi_126 3 3 0.000000143334
Capsella rubella scaffold_6 2 CH_cru_151 3 3 0.000000280668
Eutrema salsugineum scaffold_2 2 CH_esa_87 3 3 0.000000173971
Helianthus annuus HanXRQChr03 2 CH_han_37 7 27 7.67323e-17
Sechium edule LG04 2 CH_sed_251 2 2 0.000214026
Selenicereus undatus Scaffold_10417 2 CH_sun_273 2 2 0.000726639
Selenicereus undatus Scaffold_10417 2 CH_sun_274 2 2 0.000726639
Zea mays 2 2 CH_zma_240 2 4 0.000460162

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001