Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS13

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr2 1 CH_acertr_370 3 19 0.000144213
Erythranthe guttata scaffold_23 1 CH_egut_423 2 2 0.000436888
Glycine max Gm05 1 CH_gma_145 3 4 0.0000000345748
Lonicera japonica GWHAAZE00000007 1 CH_lonja_535 2 2 0.000359324
Oryza sativa ssp. japonica chr08 1 CH_osa_270 2 2 0.000158437
Salvia bowleyana GWHASIU00000008 1 CH_sbo_393 3 41 0.000330296
Simmondsia chinensis GWHAASQ00000026 1 CH_sci_214 2 2 0.000255428
Zea mays 4 1 CH_zma_239 2 3 0.000460162
Acer truncatum chr2 2 CH_acertr_370 3 19 0.000144213
Eucalyptus grandis Chr04 2 CH_egr_771 2 2 0.000175582
Erythranthe guttata scaffold_23 2 CH_egut_423 2 2 0.000436888
Glycine max Gm05 2 CH_gma_145 3 4 0.0000000345748
Lonicera japonica GWHAAZE00000007 2 CH_lonja_535 2 2 0.000359324
Oryza sativa ssp. japonica chr08 2 CH_osa_270 2 2 0.000158437
Salvia bowleyana GWHASIU00000008 2 CH_sbo_393 3 41 0.000330296
Simmondsia chinensis GWHAASQ00000026 2 CH_sci_214 2 2 0.000255428
Zea mays 4 2 CH_zma_239 2 3 0.000460162

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001