Functional clusters
Information
- Type MapMan
- Description Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS13
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Acer truncatum | chr2 | 1 | CH_acertr_370 | 3 | 19 | 0.000144213 |
Erythranthe guttata | scaffold_23 | 1 | CH_egut_423 | 2 | 2 | 0.000436888 |
Glycine max | Gm05 | 1 | CH_gma_145 | 3 | 4 | 0.0000000345748 |
Lonicera japonica | GWHAAZE00000007 | 1 | CH_lonja_535 | 2 | 2 | 0.000359324 |
Oryza sativa ssp. japonica | chr08 | 1 | CH_osa_270 | 2 | 2 | 0.000158437 |
Salvia bowleyana | GWHASIU00000008 | 1 | CH_sbo_393 | 3 | 41 | 0.000330296 |
Simmondsia chinensis | GWHAASQ00000026 | 1 | CH_sci_214 | 2 | 2 | 0.000255428 |
Zea mays | 4 | 1 | CH_zma_239 | 2 | 3 | 0.000460162 |
Acer truncatum | chr2 | 2 | CH_acertr_370 | 3 | 19 | 0.000144213 |
Eucalyptus grandis | Chr04 | 2 | CH_egr_771 | 2 | 2 | 0.000175582 |
Erythranthe guttata | scaffold_23 | 2 | CH_egut_423 | 2 | 2 | 0.000436888 |
Glycine max | Gm05 | 2 | CH_gma_145 | 3 | 4 | 0.0000000345748 |
Lonicera japonica | GWHAAZE00000007 | 2 | CH_lonja_535 | 2 | 2 | 0.000359324 |
Oryza sativa ssp. japonica | chr08 | 2 | CH_osa_270 | 2 | 2 | 0.000158437 |
Salvia bowleyana | GWHASIU00000008 | 2 | CH_sbo_393 | 3 | 41 | 0.000330296 |
Simmondsia chinensis | GWHAASQ00000026 | 2 | CH_sci_214 | 2 | 2 | 0.000255428 |
Zea mays | 4 | 2 | CH_zma_239 | 2 | 3 | 0.000460162 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |