Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU processome.60S ribosomal subunit cytoplasmic maturation.ribosome assembly factor (eIF6)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Coffea canephora chr7 1 CH_ccan_208 2 7 0.0000638831
Glycine max Gm16 1 CH_gma_420 2 2 0.000227734
Nelumbo nucifera chr3 1 CH_nnu_242 3 19 0.00000930261
Sequoiadendron giganteum chr1 1 CH_sgi_1011 2 3 0.000146142
Solanum pennellii Spenn-ch12 1 CH_spe_149 3 3 0.000000103868
Trifolium pratense Tp57577_TGAC_v2_scaf_260 1 CH_tpr_293 2 2 0.000227092
Coffea canephora chr7 2 CH_ccan_208 2 7 0.0000638831
Glycine max Gm16 2 CH_gma_420 2 2 0.000227734
Nelumbo nucifera chr3 2 CH_nnu_242 3 19 0.00000930261
Sequoiadendron giganteum chr1 2 CH_sgi_1011 2 3 0.000146142
Solanum pennellii Spenn-ch12 2 CH_spe_149 3 3 0.000000103868
Trifolium pratense Tp57577_TGAC_v2_scaf_260 2 CH_tpr_293 2 2 0.000227092

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001