Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU processome.pre-60S ribosomal subunit nuclear export.export factor (MRT4)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cucumis melo chr11 1 CH_cme_168 2 2 0.0000667111
Hydrangea macrophylla Hma1.2p1_0557F.1 1 CH_hma_332 2 2 0.000333259
Sequoiadendron giganteum chr1 1 CH_sgi_381 3 3 0.00000000355983
Cucumis melo chr11 2 CH_cme_168 2 2 0.0000667111
Hydrangea macrophylla Hma1.2p1_0557F.1 2 CH_hma_332 2 2 0.000333259
Sequoiadendron giganteum chr1 2 CH_sgi_381 3 3 0.00000000355983

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001