Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU processome.pre-60S ribosomal subunit nuclear export.export factor (ARX1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Lupinus albus Lalb_Chr03 1 CH_lal_295 2 2 0.000314895
Punica granatum NC_045131.1 1 CH_pgr_197 2 2 0.0000750356
Phaseolus vulgaris Chr08 1 CH_pvu_260 2 2 0.0000734727
Vigna mungo CM024070.1 1 CH_vmu_178 2 2 0.0000646141
Gossypium hirsutum D01 2 CH_ghi_880 2 4 0.000961196
Lupinus albus Lalb_Chr03 2 CH_lal_295 2 2 0.000314895
Lotus japonicus chr3 2 CH_lja_253 2 2 0.0000715077
Punica granatum NC_045131.1 2 CH_pgr_197 2 2 0.0000750356
Phaseolus vulgaris Chr08 2 CH_pvu_260 2 2 0.0000734727
Vigna mungo CM024070.1 2 CH_vmu_178 2 2 0.0000646141

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001