Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU processome.pre-60S ribosomal subunit nuclear assembly.assembly factor (EBP2)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-5 1 CH_aar_141 2 2 0.0000912326
Avicennia marina ScioBoG_18778_HRSCAF_18863 1 CH_ama_135 2 3 0.00077594
Amaranthus hybridus AmaHy_arrow1_Scaffold_6 1 CH_amhyb_18 4 9 0.000000000225427
Brassica carinata ChrC09 1 CH_bca_911 2 2 0.000448905
Rhododendron simsii chr11 1 CH_rsi_421 2 2 0.000193592
Selenicereus undatus Scaffold_33676 1 CH_sun_176 2 3 0.000217984
Aethionema arabicum LG-5 2 CH_aar_141 2 2 0.0000912326
Avicennia marina ScioBoG_18778_HRSCAF_18863 2 CH_ama_135 2 3 0.00077594
Amaranthus hybridus AmaHy_arrow1_Scaffold_6 2 CH_amhyb_18 4 9 0.000000000225427
Brassica carinata ChrC09 2 CH_bca_911 2 2 0.000448905
Rhododendron simsii chr11 2 CH_rsi_421 2 2 0.000193592
Selenicereus undatus Scaffold_33676 2 CH_sun_176 2 3 0.000217984

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001