Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL9

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_1 1 CH_aly_300 2 2 0.000198013
Carya illinoinensis Chr05 1 CH_cil_205 3 3 0.0000000576299
Carica papaya supercontig_183 1 CH_cpa_296 2 2 0.000285198
Eutrema salsugineum scaffold_5 1 CH_esa_239 2 2 0.00022845
Glycine max Gm06 1 CH_gma_159 3 4 0.0000000864357
Manihot esculenta Chromosome03 1 CH_mes_409 2 4 0.000366379
Populus trichocarpa Chr01 1 CH_ptr_164 3 3 0.0000000501143
Salvia bowleyana GWHASIU00000008 1 CH_sbo_451 2 2 0.00068247
Salvia bowleyana GWHASIU00000008 1 CH_sbo_452 2 2 0.00068247
Schrenkiella parvula ch1-1 1 CH_spa_212 2 2 0.000236202
Arabidopsis lyrata scaffold_1 2 CH_aly_300 2 2 0.000198013
Carya illinoinensis Chr05 2 CH_cil_205 3 3 0.0000000576299
Carica papaya supercontig_183 2 CH_cpa_296 2 2 0.000285198
Eutrema salsugineum scaffold_5 2 CH_esa_239 2 2 0.00022845
Glycine max Gm06 2 CH_gma_159 3 4 0.0000000864357
Manihot esculenta Chromosome03 2 CH_mes_409 2 4 0.000366379
Populus trichocarpa Chr01 2 CH_ptr_164 3 3 0.0000000501143
Salvia bowleyana GWHASIU00000008 2 CH_sbo_451 2 2 0.00068247
Salvia bowleyana GWHASIU00000008 2 CH_sbo_452 2 2 0.00068247
Schrenkiella parvula ch1-1 2 CH_spa_212 2 2 0.000236202

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001