Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL4

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_228 1 CH_aag_186 2 5 0.000802472
Acer truncatum chr1 1 CH_acertr_145 3 5 0.000000298163
Amaranthus hybridus AmaHy_arrow1_Scaffold_11 1 CH_amhyb_253 2 3 0.000757523
Citrus clementina scaffold_6 1 CH_ccl_371 2 3 0.000246083
Erigeron canadensis Conyza_canadensis_scaffold:6 1 CH_eca_346 2 2 0.000134617
Papaver somniferum NW_020622713.1 1 CH_pso_699 2 2 0.000810838
Populus trichocarpa Chr06 1 CH_ptr_474 2 3 0.000520176
Quercus lobata 7 1 CH_qlo_756 2 3 0.000154883
Salix brachista GWHAAZH00000006 1 CH_sbr_275 2 2 0.000189042
Anthoceros agrestis Sc2ySwM_228 2 CH_aag_186 2 5 0.000802472
Acer truncatum chr1 2 CH_acertr_145 3 5 0.000000298163
Amaranthus hybridus AmaHy_arrow1_Scaffold_11 2 CH_amhyb_253 2 3 0.000757523
Citrus clementina scaffold_6 2 CH_ccl_371 2 3 0.000246083
Erigeron canadensis Conyza_canadensis_scaffold:6 2 CH_eca_346 2 2 0.000134617
Papaver somniferum NW_020622713.1 2 CH_pso_699 2 2 0.000810838
Populus trichocarpa Chr06 2 CH_ptr_474 2 3 0.000520176
Quercus lobata 7 2 CH_qlo_756 2 3 0.000154883
Salix brachista GWHAAZH00000006 2 CH_sbr_275 2 2 0.000189042

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001