Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL3

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Erythranthe guttata scaffold_2 1 CH_egut_357 2 2 0.000218444
Eutrema salsugineum scaffold_17 1 CH_esa_302 2 3 0.000685305
Manihot esculenta Chromosome07 1 CH_mes_194 3 3 0.000000469831
Manihot esculenta Chromosome10 1 CH_mes_214 3 4 0.00000187901
Papaver somniferum NC_039360.1 1 CH_pso_626 2 2 0.000472989
Salvia bowleyana GWHASIU00000002 1 CH_sbo_466 2 4 0.000818901
Sequoiadendron giganteum chr3 1 CH_sgi_1087 2 2 0.000146145
Utricularia gibba unitig_61 1 CH_ugi_253 2 2 0.000440755
Erythranthe guttata scaffold_2 2 CH_egut_357 2 2 0.000218444
Eutrema salsugineum scaffold_17 2 CH_esa_302 2 3 0.000685305
Manihot esculenta Chromosome07 2 CH_mes_194 3 3 0.000000469831
Manihot esculenta Chromosome10 2 CH_mes_214 3 4 0.00000187901
Papaver somniferum NC_039360.1 2 CH_pso_626 2 2 0.000472989
Salvia bowleyana GWHASIU00000002 2 CH_sbo_466 2 4 0.000818901
Sequoiadendron giganteum chr3 2 CH_sgi_1087 2 2 0.000146145
Utricularia gibba unitig_61 2 CH_ugi_253 2 2 0.000440755

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001