Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.methylation.C/D small nucleolar ribonucleoprotein (snoRNP) rRNA methylation complex.methyltransferase component Nop1/fibrillarin

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis thaliana Chr5 1 CH_ath_384 2 4 0.000515661
Cardamine hirsuta Chr8 1 CH_chi_285 2 2 0.000207361
Eutrema salsugineum scaffold_2 1 CH_esa_69 3 3 0.0000000347941
Olea europaea scaffold1148 1 CH_oeu_149 2 2 0.0000533789
Salix brachista GWHAAZH00000016 1 CH_sbr_356 2 3 0.000567096
Trifolium pratense Tp57577_TGAC_v2_LG1 1 CH_tpr_288 2 2 0.000227092
Arabidopsis thaliana Chr5 2 CH_ath_384 2 4 0.000515661
Cardamine hirsuta Chr8 2 CH_chi_285 2 2 0.000207361
Eutrema salsugineum scaffold_2 2 CH_esa_69 3 3 0.0000000347941
Olea europaea scaffold1148 2 CH_oeu_149 2 2 0.0000533789
Salix brachista GWHAAZH00000016 2 CH_sbr_356 2 3 0.000567096
Trifolium pratense Tp57577_TGAC_v2_LG1 2 CH_tpr_288 2 2 0.000227092

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001