Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.rRNA transcription.rDNA transcriptional regulator (NOF1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Coffea canephora chr6 1 CH_ccan_221 2 8 0.00007666
Daucus carota DCARv2_Chr2 1 CH_dca_230 2 2 0.0000637775
Salvia bowleyana GWHASIU00000002 1 CH_sbo_199 3 10 0.00000149007
Sequoiadendron giganteum chr5 1 CH_sgi_1271 2 3 0.000438418
Coffea canephora chr6 2 CH_ccan_221 2 8 0.00007666
Daucus carota DCARv2_Chr2 2 CH_dca_230 2 2 0.0000637775
Salvia bowleyana GWHASIU00000002 2 CH_sbo_199 3 10 0.00000149007
Sequoiadendron giganteum chr5 2 CH_sgi_1271 2 3 0.000438418

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001