Functional clusters
Information
- Type MapMan
- Description RNA processing.mRNA silencing.miRNA pathway.miRNA uridylation and cytidylation.uridylyltransferase (HESO1)
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Aethionema arabicum | LG-5 | 1 | CH_aar_146 | 2 | 2 | 0.0000912326 |
Fragaria x ananassa | Fvb7-4 | 1 | CH_fan_617 | 2 | 2 | 0.000832663 |
Fragaria vesca | Fvb7 | 1 | CH_fve_260 | 2 | 2 | 0.0000589102 |
Oryza sativa ssp. japonica | chr01 | 1 | CH_osa_204 | 2 | 2 | 0.0000528123 |
Physcomitrium patens | Chr09 | 1 | CH_ppa_86 | 2 | 2 | 0.0000612726 |
Quercus lobata | 8 | 1 | CH_qlo_103 | 5 | 6 | 3.19772e-16 |
Rosa chinensis | RcHm_v2.0_Chr1 | 1 | CH_rch_472 | 2 | 2 | 0.0000398653 |
Aethionema arabicum | LG-5 | 2 | CH_aar_146 | 2 | 2 | 0.0000912326 |
Fragaria x ananassa | Fvb7-4 | 2 | CH_fan_617 | 2 | 2 | 0.000832663 |
Fragaria vesca | Fvb7 | 2 | CH_fve_260 | 2 | 2 | 0.0000589102 |
Oryza sativa ssp. japonica | chr01 | 2 | CH_osa_204 | 2 | 2 | 0.0000528123 |
Physcomitrium patens | Chr09 | 2 | CH_ppa_86 | 2 | 2 | 0.0000612726 |
Quercus lobata | 8 | 2 | CH_qlo_103 | 5 | 6 | 3.19772e-16 |
Rosa chinensis | RcHm_v2.0_Chr1 | 2 | CH_rch_472 | 2 | 2 | 0.0000398653 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |