Functional clusters

Information

  • Type MapMan
  • Description RNA processing.mRNA silencing.miRNA pathway.miRNA uridylation and cytidylation.uridylyltransferase (HESO1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-5 1 CH_aar_146 2 2 0.0000912326
Fragaria x ananassa Fvb7-4 1 CH_fan_617 2 2 0.000832663
Fragaria vesca Fvb7 1 CH_fve_260 2 2 0.0000589102
Oryza sativa ssp. japonica chr01 1 CH_osa_204 2 2 0.0000528123
Physcomitrium patens Chr09 1 CH_ppa_86 2 2 0.0000612726
Quercus lobata 8 1 CH_qlo_103 5 6 3.19772e-16
Rosa chinensis RcHm_v2.0_Chr1 1 CH_rch_472 2 2 0.0000398653
Aethionema arabicum LG-5 2 CH_aar_146 2 2 0.0000912326
Fragaria x ananassa Fvb7-4 2 CH_fan_617 2 2 0.000832663
Fragaria vesca Fvb7 2 CH_fve_260 2 2 0.0000589102
Oryza sativa ssp. japonica chr01 2 CH_osa_204 2 2 0.0000528123
Physcomitrium patens Chr09 2 CH_ppa_86 2 2 0.0000612726
Quercus lobata 8 2 CH_qlo_103 5 6 3.19772e-16
Rosa chinensis RcHm_v2.0_Chr1 2 CH_rch_472 2 2 0.0000398653

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001