Functional clusters

Information

  • Type MapMan
  • Description RNA processing.mRNA sequestration.mRNA endoribonuclease (G3BP)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_3 1 CH_aly_151 3 3 0.000000784211
Durio zibethinus NW_019167926.1 1 CH_dzi_167 3 4 0.0000105149
Eutrema salsugineum scaffold_5 1 CH_esa_59 4 5 0.00000000218551
Helianthus annuus HanXRQChr10 1 CH_han_383 3 5 0.0000152249
Punica granatum NC_045134.1 1 CH_pgr_152 3 5 0.00000295516
Rhododendron simsii chr10 1 CH_rsi_243 4 21 0.00000237886
Theobroma cacao Chromosome_10 1 CH_tca_89 4 4 0.000000000247519
Arabidopsis lyrata scaffold_3 2 CH_aly_151 3 3 0.000000784211
Durio zibethinus NW_019167926.1 2 CH_dzi_167 3 4 0.0000105149
Eutrema salsugineum scaffold_5 2 CH_esa_59 4 5 0.00000000218551
Helianthus annuus HanXRQChr10 2 CH_han_383 3 5 0.0000152249
Punica granatum NC_045134.1 2 CH_pgr_152 3 5 0.00000295516
Rhododendron simsii chr10 2 CH_rsi_243 4 21 0.00000237886
Theobroma cacao Chromosome_10 2 CH_tca_89 4 4 0.000000000247519

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001