Functional clusters
Information
- Type MapMan
- Description RNA processing.RNA modification.tRNA methylation.TRM11-TRM112 tRNA guanosine-methyltransferase complex.component TRM11
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brassica napus | C02 | 1 | CH_bna_391 | 3 | 21 | 0.0000137246 |
| Brassica oleracea | C2 | 1 | CH_bol_162 | 3 | 16 | 0.0000035885 |
| Cucumis sativus L. | chr7 | 1 | CH_csa_19 | 6 | 7 | 4.47026e-18 |
| Sequoiadendron giganteum | chr5 | 1 | CH_sgi_815 | 2 | 2 | 0.0000487151 |
| Trochodendron aralioides | group5 | 1 | CH_tar_256 | 2 | 2 | 0.0000600366 |
| Utricularia gibba | unitig_26 | 1 | CH_ugi_143 | 2 | 2 | 0.0000734592 |
| Brassica oleracea | C2 | 2 | CH_bol_162 | 3 | 16 | 0.0000035885 |
| Cucumis sativus L. | chr7 | 2 | CH_csa_19 | 6 | 7 | 4.47026e-18 |
| Sequoiadendron giganteum | chr5 | 2 | CH_sgi_815 | 2 | 2 | 0.0000487151 |
| Trochodendron aralioides | group5 | 2 | CH_tar_256 | 2 | 2 | 0.0000600366 |
| Utricularia gibba | unitig_26 | 2 | CH_ugi_143 | 2 | 2 | 0.0000734592 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |