Functional clusters

Information

  • Type MapMan
  • Description RNA processing.RNA surveillance.mRNA deadenylation-dependent decay.mRNA deadenylation.CCR4-NOT complex.deadenylase component CAF1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00030 1 CH_atr_163 2 2 0.0000794407
Davidia involucrata GWHABJS00000010 1 CH_din_528 2 3 0.000900173
Malus domestica Chr03 1 CH_mdo_540 2 2 0.000227527
Prunus persica Pp06 1 CH_ppe_217 3 7 0.0000011683
Pisum sativum chr7LG7 1 CH_psa_70 4 13 0.00000000456444
Trochodendron aralioides group2 1 CH_tar_20 5 5 0.0000000000000450242
Amborella trichopoda AmTr_v1.0_scaffold00030 2 CH_atr_163 2 2 0.0000794407
Davidia involucrata GWHABJS00000010 2 CH_din_528 2 3 0.000900173
Malus domestica Chr03 2 CH_mdo_540 2 2 0.000227527
Prunus persica Pp06 2 CH_ppe_217 3 7 0.0000011683
Pisum sativum chr7LG7 2 CH_psa_70 4 13 0.00000000456444
Trochodendron aralioides group2 2 CH_tar_20 5 5 0.0000000000000450242

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001