Functional clusters

Information

  • Type MapMan
  • Description RNA processing.RNA 3'-end processing.mRNA polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.nuclease component CPSF73-I

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr10 1 CH_acertr_285 2 2 0.000070497
Aquilegia oxysepala CHR07 1 CH_aox_205 2 3 0.000240587
Citrus clementina scaffold_5 1 CH_ccl_290 2 2 0.0000820311
Carya illinoinensis Chr06 1 CH_cil_465 2 4 0.000371874
Lonicera japonica GWHAAZE00000005 1 CH_lonja_360 2 2 0.0000598874
Magnolia biondii Chr04 1 CH_mbi_327 2 2 0.0000485661
Prunus persica Pp01 1 CH_ppe_324 2 2 0.0000745962
Populus trichocarpa Chr17 1 CH_ptr_135 3 3 0.00000000501143
Rhododendron simsii chr10 1 CH_rsi_335 2 2 0.0000645307
Salix brachista GWHAAZH00000017 1 CH_sbr_217 2 2 0.000063014
Sequoiadendron giganteum chr11 1 CH_sgi_811 2 2 0.0000487151
Trochodendron aralioides group0 1 CH_tar_255 2 2 0.0000600366
Vaccinium macrocarpon chr5_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_226 2 2 0.0000929238
Acer truncatum chr10 2 CH_acertr_285 2 2 0.000070497
Aquilegia oxysepala CHR07 2 CH_aox_205 2 3 0.000240587
Citrus clementina scaffold_5 2 CH_ccl_290 2 2 0.0000820311
Carya illinoinensis Chr06 2 CH_cil_465 2 4 0.000371874
Eucalyptus grandis Chr07 2 CH_egr_378 3 4 0.0000000205528
Lonicera japonica GWHAAZE00000005 2 CH_lonja_360 2 2 0.0000598874
Magnolia biondii Chr04 2 CH_mbi_327 2 2 0.0000485661
Prunus persica Pp01 2 CH_ppe_324 2 2 0.0000745962
Populus trichocarpa Chr17 2 CH_ptr_135 3 3 0.00000000501143
Rhododendron simsii chr10 2 CH_rsi_335 2 2 0.0000645307
Salix brachista GWHAAZH00000017 2 CH_sbr_217 2 2 0.000063014
Sequoiadendron giganteum chr11 2 CH_sgi_811 2 2 0.0000487151
Trochodendron aralioides group0 2 CH_tar_255 2 2 0.0000600366
Vaccinium macrocarpon chr5_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_226 2 2 0.0000929238

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001