Functional clusters

Information

  • Type MapMan
  • Description RNA processing.RNA 3'-end processing.mRNA polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.component CPSF100/Ydh1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group3 1 CH_ach_128 2 2 0.000162964
Arabidopsis lyrata scaffold_6 1 CH_aly_348 2 4 0.000396
Coffea canephora chr2 1 CH_ccan_156 2 3 0.0000127767
Glycine max Gm11 1 CH_gma_216 3 8 0.00000120987
Micromonas commoda Chr_01 1 CH_mco_14 2 2 0.000197961
Rosa chinensis RcHm_v2.0_Chr1 1 CH_rch_724 2 2 0.000398653
Vigna mungo CM024077.1 1 CH_vmu_189 2 2 0.0000646141
Vanilla planifolia CM028163.1 1 CH_vpl_129 3 32 0.0000405762
Actinidia chinensis Lachesis_group3 2 CH_ach_128 2 2 0.000162964
Arabidopsis lyrata scaffold_6 2 CH_aly_348 2 4 0.000396
Coffea canephora chr2 2 CH_ccan_156 2 3 0.0000127767
Glycine max Gm11 2 CH_gma_216 3 8 0.00000120987
Micromonas commoda Chr_01 2 CH_mco_14 2 2 0.000197961
Rosa chinensis RcHm_v2.0_Chr1 2 CH_rch_724 2 2 0.000398653
Vigna mungo CM024077.1 2 CH_vmu_189 2 2 0.0000646141
Vanilla planifolia CM028163.1 2 CH_vpl_129 3 32 0.0000405762

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001