Functional clusters
Information
- Type MapMan
- Description RNA processing.RNA 3'-end processing.mRNA polyadenylation.poly(A) RNA polymerase activity.poly(A) RNA polymerase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aquilegia oxysepala | CHR03 | 1 | CH_aox_62 | 3 | 3 | 0.0000000385927 |
| Brassica carinata | ChrC06 | 1 | CH_bca_949 | 3 | 50 | 0.000469264 |
| Camellia sinensis var. sinensis | Chr10 | 1 | CH_camsi_262 | 4 | 9 | 0.000000086633 |
| Camellia sinensis var. sinensis | Chr6 | 1 | CH_camsi_514 | 3 | 6 | 0.0000428613 |
| Chara braunii | BFEA01000123 | 1 | CH_cbr_16 | 3 | 3 | 0.0000000077605 |
| Carpinus fangiana | Cfa08 | 1 | CH_cfa_44 | 5 | 10 | 0.00000000000782983 |
| Nelumbo nucifera | chr7 | 1 | CH_nnu_433 | 2 | 2 | 0.000654022 |
| Olea europaea | chr12 | 1 | CH_oeu_296 | 2 | 2 | 0.000320273 |
| Prunus persica | Pp03 | 1 | CH_ppe_453 | 2 | 2 | 0.000447577 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 1 | CH_rch_314 | 3 | 5 | 0.000000476719 |
| Striga asiatica | scaffold115 | 1 | CH_sas_153 | 2 | 2 | 0.000938057 |
| Salvia bowleyana | GWHASIU00000007 | 1 | CH_sbo_331 | 2 | 2 | 0.000136494 |
| Salix brachista | GWHAAZH00000015 | 1 | CH_sbr_374 | 2 | 2 | 0.00063014 |
| Sequoiadendron giganteum | chr10 | 1 | CH_sgi_670 | 3 | 7 | 0.0000104603 |
| Aquilegia oxysepala | CHR03 | 2 | CH_aox_62 | 3 | 3 | 0.0000000385927 |
| Brassica carinata | ChrC06 | 2 | CH_bca_949 | 3 | 50 | 0.000469264 |
| Camellia sinensis var. sinensis | Chr10 | 2 | CH_camsi_262 | 4 | 9 | 0.000000086633 |
| Camellia sinensis var. sinensis | Chr6 | 2 | CH_camsi_514 | 3 | 6 | 0.0000428613 |
| Chara braunii | BFEA01000123 | 2 | CH_cbr_16 | 3 | 3 | 0.0000000077605 |
| Carpinus fangiana | Cfa08 | 2 | CH_cfa_44 | 5 | 10 | 0.00000000000782983 |
| Nelumbo nucifera | chr7 | 2 | CH_nnu_433 | 2 | 2 | 0.000654022 |
| Olea europaea | chr12 | 2 | CH_oeu_296 | 2 | 2 | 0.000320273 |
| Prunus persica | Pp03 | 2 | CH_ppe_453 | 2 | 2 | 0.000447577 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 2 | CH_rch_314 | 3 | 5 | 0.000000476719 |
| Striga asiatica | scaffold115 | 2 | CH_sas_153 | 2 | 2 | 0.000938057 |
| Salvia bowleyana | GWHASIU00000007 | 2 | CH_sbo_331 | 2 | 2 | 0.000136494 |
| Salix brachista | GWHAAZH00000015 | 2 | CH_sbr_374 | 2 | 2 | 0.00063014 |
| Sequoiadendron giganteum | chr10 | 2 | CH_sgi_670 | 3 | 7 | 0.0000104603 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |