Functional clusters
Information
- Type MapMan
- Description RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP factor activities.splicing factor (SLU7)
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Acer truncatum | chr5 | 1 | CH_acertr_501 | 2 | 2 | 0.000422982 |
Acer truncatum | chr4 | 1 | CH_acertr_502 | 2 | 2 | 0.000422982 |
Actinidia chinensis | Lachesis_group2 | 1 | CH_ach_198 | 2 | 2 | 0.000325928 |
Aquilegia oxysepala | CHR03 | 1 | CH_aox_340 | 2 | 2 | 0.000801989 |
Cicer arietinum L. | Ca_LG3_v3 | 1 | CH_car_118 | 3 | 27 | 0.0000265536 |
Corylus avellana | 8 | 1 | CH_cav_363 | 2 | 2 | 0.000230008 |
Carya illinoinensis | Chr03 | 1 | CH_cil_430 | 2 | 2 | 0.000185948 |
Davidia involucrata | GWHABJS00000010 | 1 | CH_din_351 | 2 | 2 | 0.000150038 |
Helianthus annuus | HanXRQChr09 | 1 | CH_han_646 | 2 | 2 | 0.000386429 |
Magnolia biondii | Chr07 | 1 | CH_mbi_181 | 3 | 4 | 0.000000283024 |
Nelumbo nucifera | chr1 | 1 | CH_nnu_105 | 3 | 4 | 0.000000114062 |
Papaver somniferum | NC_039359.1 | 1 | CH_pso_676 | 2 | 3 | 0.000675676 |
Acer truncatum | chr5 | 2 | CH_acertr_501 | 2 | 2 | 0.000422982 |
Acer truncatum | chr4 | 2 | CH_acertr_502 | 2 | 2 | 0.000422982 |
Actinidia chinensis | Lachesis_group2 | 2 | CH_ach_198 | 2 | 2 | 0.000325928 |
Aquilegia oxysepala | CHR03 | 2 | CH_aox_340 | 2 | 2 | 0.000801989 |
Cicer arietinum L. | Ca_LG3_v3 | 2 | CH_car_118 | 3 | 27 | 0.0000265536 |
Corylus avellana | 8 | 2 | CH_cav_363 | 2 | 2 | 0.000230008 |
Carya illinoinensis | Chr03 | 2 | CH_cil_430 | 2 | 2 | 0.000185948 |
Davidia involucrata | GWHABJS00000010 | 2 | CH_din_351 | 2 | 2 | 0.000150038 |
Helianthus annuus | HanXRQChr09 | 2 | CH_han_646 | 2 | 2 | 0.000386429 |
Magnolia biondii | Chr07 | 2 | CH_mbi_181 | 3 | 4 | 0.000000283024 |
Nelumbo nucifera | chr1 | 2 | CH_nnu_105 | 3 | 4 | 0.000000114062 |
Papaver somniferum | NC_039359.1 | 2 | CH_pso_676 | 2 | 3 | 0.000675676 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |