Functional clusters

Information

  • Type MapMan
  • Description RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).pre-mRNA splicing factor (SF1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Capsicum annuum PGAv.1.6.scaffold485 1 CH_can_318 2 3 0.000247821
Sequoiadendron giganteum chr6 1 CH_sgi_1395 2 3 0.000876823
Solanum pennellii Spenn-ch05 1 CH_spe_352 2 2 0.000133437
Capsicum annuum PGAv.1.6.scaffold485 2 CH_can_318 2 3 0.000247821
Sequoiadendron giganteum chr6 2 CH_sgi_1395 2 3 0.000876823
Solanum pennellii Spenn-ch05 2 CH_spe_352 2 2 0.000133437

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001