Functional clusters

Information

  • Type MapMan
  • Description RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).pre-mRNA splicing factor (SPF31)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Ceratophyllum demersum 6 1 CH_cde_164 2 2 0.000236939
Olea europaea scaffold773 1 CH_oeu_225 2 2 0.000160137
Physcomitrium patens Chr14 1 CH_ppa_85 2 2 0.0000612726
Sequoiadendron giganteum chr1 1 CH_sgi_805 2 2 0.0000487151
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_225 2 2 0.0000929238
Ceratophyllum demersum 6 2 CH_cde_164 2 2 0.000236939
Olea europaea scaffold773 2 CH_oeu_225 2 2 0.000160137
Physcomitrium patens Chr14 2 CH_ppa_85 2 2 0.0000612726
Sequoiadendron giganteum chr1 2 CH_sgi_805 2 2 0.0000487151
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_225 2 2 0.0000929238

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001