Functional clusters

Information

  • Type MapMan
  • Description RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3A complex.component SF3A2

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00176 1 CH_atr_162 2 2 0.0000794407
Camellia sinensis var. sinensis Chr10 1 CH_camsi_788 2 5 0.000458516
Magnolia biondii Chr17 1 CH_mbi_497 2 4 0.000291382
Pisum sativum chr1LG6 1 CH_psa_38 4 5 0.0000000000106457
Theobroma cacao Chromosome_5 1 CH_tca_380 2 4 0.000439399
Amborella trichopoda AmTr_v1.0_scaffold00176 2 CH_atr_162 2 2 0.0000794407
Camellia sinensis var. sinensis Chr10 2 CH_camsi_788 2 5 0.000458516
Magnolia biondii Chr17 2 CH_mbi_497 2 4 0.000291382
Pisum sativum chr1LG6 2 CH_psa_38 4 5 0.0000000000106457
Theobroma cacao Chromosome_5 2 CH_tca_380 2 4 0.000439399

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001