Functional clusters

Information

  • Type MapMan
  • Description RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3A complex.component SF3A1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Avicennia marina ScioBoG_102840_HRSCAF_103099 1 CH_ama_75 2 18 0.000258654
Arabidopsis thaliana Chr1 1 CH_ath_297 2 5 0.00017189
Chenopodium quinoa C_Quinoa_Scaffold_1000 1 CH_cqu_482 2 2 0.000473821
Capsella rubella scaffold_1 1 CH_cru_247 2 2 0.0000731154
Lupinus albus Lalb_Chr02 1 CH_lal_41 4 6 0.000000000032525
Avicennia marina ScioBoG_102840_HRSCAF_103099 2 CH_ama_75 2 18 0.000258654
Arabidopsis thaliana Chr1 2 CH_ath_297 2 5 0.00017189
Chenopodium quinoa C_Quinoa_Scaffold_1000 2 CH_cqu_482 2 2 0.000473821
Capsella rubella scaffold_1 2 CH_cru_247 2 2 0.0000731154
Lupinus albus Lalb_Chr02 2 CH_lal_41 4 6 0.000000000032525

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001