Functional clusters

Information

  • Type MapMan
  • Description RNA processing.organelle machinery.pre-mRNA splicing.mitochondrial RNA splicing.splicing factor (MID1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Carica papaya supercontig_209 1 CH_cpa_264 2 3 0.000285185
Davidia involucrata GWHABJS00000020 1 CH_din_522 2 4 0.00090015
Phaseolus vulgaris Chr05 1 CH_pvu_449 2 5 0.000734646
Simmondsia chinensis GWHAASQ00000021 1 CH_sci_211 2 2 0.000255428
Solanum tuberosum ST4.03ch01 1 CH_stu_597 2 6 0.0007686
Carica papaya supercontig_209 2 CH_cpa_264 2 3 0.000285185
Davidia involucrata GWHABJS00000020 2 CH_din_522 2 4 0.00090015
Phaseolus vulgaris Chr05 2 CH_pvu_449 2 5 0.000734646
Simmondsia chinensis GWHAASQ00000021 2 CH_sci_211 2 2 0.000255428
Solanum tuberosum ST4.03ch01 2 CH_stu_597 2 6 0.0007686

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001