Functional clusters
Information
- Type MapMan
- Description RNA processing.organelle machinery.pre-mRNA splicing.mitochondrial RNA splicing.group-II intron splicing.splicing factor (WTF9)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Fragaria vesca | Fvb7 | 1 | CH_fve_319 | 2 | 3 | 0.000176725 |
| Manihot esculenta | Chromosome07 | 1 | CH_mes_206 | 3 | 12 | 0.00000123017 |
| Theobroma cacao | Chromosome_10 | 1 | CH_tca_424 | 2 | 5 | 0.000732306 |
| Fragaria vesca | Fvb7 | 2 | CH_fve_319 | 2 | 3 | 0.000176725 |
| Manihot esculenta | Chromosome07 | 2 | CH_mes_206 | 3 | 12 | 0.00000123017 |
| Theobroma cacao | Chromosome_10 | 2 | CH_tca_424 | 2 | 5 | 0.000732306 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |