Functional clusters

Information

  • Type MapMan
  • Description RNA processing.organelle machinery.pre-mRNA splicing.plastidial RNA splicing.group-II intron splicing.basal splicing factor (RH3)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata Contig1379 1 CH_bca_1126 2 3 0.000961902
Cannabis sativa NC_044375.1 1 CH_cansat_211 2 2 0.0000656642
Populus trichocarpa Chr05 1 CH_ptr_529 2 6 0.000866902
Brassica carinata Contig1379 2 CH_bca_1126 2 3 0.000961902
Cannabis sativa NC_044375.1 2 CH_cansat_211 2 2 0.0000656642
Populus trichocarpa Chr05 2 CH_ptr_529 2 6 0.000866902

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001