Functional clusters

Information

  • Type MapMan
  • Description RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.RNA editing co-factor (WTG1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrB05 1 CH_bca_881 2 4 0.000384762
Camellia sinensis var. sinensis Chr7 1 CH_camsi_268 3 7 0.000000110382
Glycine max Gm06 1 CH_gma_370 2 2 0.000113867
Magnolia biondii Chr19 1 CH_mbi_526 2 2 0.000291397
Magnolia biondii Chr07 1 CH_mbi_527 2 2 0.000291397
Manihot esculenta Chromosome06 1 CH_mes_110 4 13 0.000000000488297
Physcomitrium patens Chr05 1 CH_ppa_287 2 2 0.000612726
Quercus lobata 9 1 CH_qlo_457 3 10 0.000000479723
Brassica carinata ChrB05 2 CH_bca_881 2 4 0.000384762
Camellia sinensis var. sinensis Chr7 2 CH_camsi_268 3 7 0.000000110382
Glycine max Gm06 2 CH_gma_370 2 2 0.000113867
Magnolia biondii Chr19 2 CH_mbi_526 2 2 0.000291397
Magnolia biondii Chr07 2 CH_mbi_527 2 2 0.000291397
Manihot esculenta Chromosome06 2 CH_mes_110 4 13 0.000000000488297
Physcomitrium patens Chr05 2 CH_ppa_287 2 2 0.000612726
Quercus lobata 9 2 CH_qlo_457 3 10 0.000000479723

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001