Functional clusters
Information
- Type MapMan
- Description RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.RNA editing co-factor (WTG1)
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Brassica carinata | ChrB05 | 1 | CH_bca_881 | 2 | 4 | 0.000384762 |
Camellia sinensis var. sinensis | Chr7 | 1 | CH_camsi_268 | 3 | 7 | 0.000000110382 |
Glycine max | Gm06 | 1 | CH_gma_370 | 2 | 2 | 0.000113867 |
Magnolia biondii | Chr19 | 1 | CH_mbi_526 | 2 | 2 | 0.000291397 |
Magnolia biondii | Chr07 | 1 | CH_mbi_527 | 2 | 2 | 0.000291397 |
Manihot esculenta | Chromosome06 | 1 | CH_mes_110 | 4 | 13 | 0.000000000488297 |
Physcomitrium patens | Chr05 | 1 | CH_ppa_287 | 2 | 2 | 0.000612726 |
Quercus lobata | 9 | 1 | CH_qlo_457 | 3 | 10 | 0.000000479723 |
Brassica carinata | ChrB05 | 2 | CH_bca_881 | 2 | 4 | 0.000384762 |
Camellia sinensis var. sinensis | Chr7 | 2 | CH_camsi_268 | 3 | 7 | 0.000000110382 |
Glycine max | Gm06 | 2 | CH_gma_370 | 2 | 2 | 0.000113867 |
Magnolia biondii | Chr19 | 2 | CH_mbi_526 | 2 | 2 | 0.000291397 |
Magnolia biondii | Chr07 | 2 | CH_mbi_527 | 2 | 2 | 0.000291397 |
Manihot esculenta | Chromosome06 | 2 | CH_mes_110 | 4 | 13 | 0.000000000488297 |
Physcomitrium patens | Chr05 | 2 | CH_ppa_287 | 2 | 2 | 0.000612726 |
Quercus lobata | 9 | 2 | CH_qlo_457 | 3 | 10 | 0.000000479723 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |