Functional clusters

Information

  • Type MapMan
  • Description RNA processing.organelle machinery.ribonuclease activities.endoribonuclease (YbeY)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrB06 1 CH_bca_537 2 2 0.0000213764
Camellia sinensis var. sinensis Chr14 1 CH_camsi_710 2 4 0.000275116
Cannabis sativa NC_044374.1 1 CH_cansat_375 2 5 0.000656577
Citrus clementina scaffold_1 1 CH_ccl_438 2 4 0.000492146
Fragaria x ananassa Fvb2-4 1 CH_fan_472 2 2 0.000277554
Fragaria x ananassa Fvb2-3 1 CH_fan_473 2 2 0.000277554
Fragaria x ananassa Fvb2-1 1 CH_fan_474 2 2 0.000277554
Fragaria vesca Fvb2 1 CH_fve_273 2 2 0.0000589102
Malus domestica Chr08 1 CH_mdo_488 2 2 0.000113763
Prunus persica Pp01 1 CH_ppe_344 2 2 0.0000745962
Rosa chinensis RcHm_v2.0_Chr6 1 CH_rch_669 2 2 0.000239192
Brassica carinata ChrB06 2 CH_bca_537 2 2 0.0000213764
Camellia sinensis var. sinensis Chr14 2 CH_camsi_710 2 4 0.000275116
Cannabis sativa NC_044374.1 2 CH_cansat_375 2 5 0.000656577
Citrus clementina scaffold_1 2 CH_ccl_438 2 4 0.000492146
Fragaria x ananassa Fvb2-4 2 CH_fan_472 2 2 0.000277554
Fragaria x ananassa Fvb2-3 2 CH_fan_473 2 2 0.000277554
Fragaria x ananassa Fvb2-1 2 CH_fan_474 2 2 0.000277554
Fragaria vesca Fvb2 2 CH_fve_273 2 2 0.0000589102
Malus domestica Chr08 2 CH_mdo_488 2 2 0.000113763
Prunus persica Pp01 2 CH_ppe_344 2 2 0.0000745962
Rosa chinensis RcHm_v2.0_Chr6 2 CH_rch_669 2 2 0.000239192

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001