Functional clusters

Information

  • Type MapMan
  • Description RNA processing.messenger ribonucleoparticle (mRNP) export.mRNP remodeling.LOS4 helicase-regulatory factor (GLE1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aquilegia oxysepala CHR05 1 CH_aox_292 2 2 0.000481193
Fragaria x ananassa Fvb5-3 1 CH_fan_515 2 2 0.000388576
Lonicera japonica GWHAAZE00000003 1 CH_lonja_480 2 2 0.000179662
Olea europaea chr12 1 CH_oeu_175 2 2 0.0000533789
Rhododendron simsii chr12 1 CH_rsi_352 2 2 0.0000645307
Trochodendron aralioides group12 1 CH_tar_367 2 2 0.00018011
Utricularia gibba unitig_22 1 CH_ugi_172 2 2 0.0000734592
Vaccinium macrocarpon chr4_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_49 4 4 0.0000000000120374
Aquilegia oxysepala CHR05 2 CH_aox_292 2 2 0.000481193
Fragaria x ananassa Fvb5-3 2 CH_fan_515 2 2 0.000388576
Lonicera japonica GWHAAZE00000003 2 CH_lonja_480 2 2 0.000179662
Olea europaea chr12 2 CH_oeu_175 2 2 0.0000533789
Rhododendron simsii chr12 2 CH_rsi_352 2 2 0.0000645307
Trochodendron aralioides group12 2 CH_tar_367 2 2 0.00018011
Utricularia gibba unitig_22 2 CH_ugi_172 2 2 0.0000734592
Vaccinium macrocarpon chr4_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_49 4 4 0.0000000000120374

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001