Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.organelle machinery.transcriptional regulation.transcription factor (mTERF)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-10 1 CH_aar_135 3 3 0.0000817185
Aethionema arabicum LG-1 1 CH_aar_39 5 5 0.000000000168722
Aethionema arabicum LG-1 1 CH_aar_40 5 5 0.000000000168722
Acer truncatum chr6 1 CH_acertr_250 3 3 0.0000681313
Acer truncatum chr5 1 CH_acertr_27 6 7 0.000000000000894139
Actinidia chinensis Lachesis_group10 1 CH_ach_15 6 15 0.000000000430319
Actinidia chinensis Lachesis_group19 1 CH_ach_6 6 7 0.000000000000606367
Arabidopsis lyrata scaffold_2 1 CH_aly_2 16 31 3.69973e-34
Aquilegia oxysepala CHR05 1 CH_aox_201 3 3 0.000200923
Aquilegia oxysepala CHR02 1 CH_aox_41 6 14 0.00000000398782
Aquilegia oxysepala CHR05 1 CH_aox_58 6 19 0.0000000357448
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.11 1 CH_arhy_426 4 15 0.0000430982
Arabidopsis thaliana Chr1 1 CH_ath_13 9 36 4.23776e-18
Amborella trichopoda AmTr_v1.0_scaffold00010 1 CH_atr_7 15 52 1.02764e-25
Amborella trichopoda AmTr_v1.0_scaffold00126 1 CH_atr_95 4 4 0.000000268295
Brassica carinata ChrB07 1 CH_bca_117 5 7 0.000000000693402
Brassica carinata ChrC06 1 CH_bca_341 4 6 0.000000626213
Brassica carinata ChrC04 1 CH_bca_373 4 7 0.00000146022
Brassica napus A09 1 CH_bna_175 4 4 0.0000000426359
Brassica napus C09 1 CH_bna_289 4 7 0.00000148946
Brassica napus A01 1 CH_bna_458 3 3 0.0000547191
Brassica napus C01 1 CH_bna_86 5 6 0.000000000196828
Brassica oleracea C4 1 CH_bol_258 4 23 0.0000840043
Brassica rapa A09 1 CH_bra_86 4 5 0.0000000975694
Camellia sinensis var. sinensis Chr11 1 CH_camsi_126 5 5 0.0000000000567856
Camellia sinensis var. sinensis Chr9 1 CH_camsi_16 12 30 2.62216e-24
Camellia sinensis var. sinensis Chr12 1 CH_camsi_255 5 13 0.0000000725908
Cicer arietinum L. Ca_LG1_v3 1 CH_car_10 5 5 0.000000000119988
Cicer arietinum L. Ca_LG1_v3 1 CH_car_4 6 7 0.00000000000104497
Corylus avellana 2 1 CH_cav_159 4 6 0.00000204923
Corylus avellana 4 1 CH_cav_294 3 3 0.0000939962
Corylus avellana 1 1 CH_cav_494 3 5 0.000937837
Coffea canephora chr10 1 CH_ccan_187 3 16 0.0000350263
Ceratophyllum demersum 2 1 CH_cde_211 3 5 0.000419868
Ceratophyllum demersum 8 1 CH_cde_53 4 8 0.00000324408
Carpinus fangiana Cfa04 1 CH_cfa_198 4 16 0.0000412641
Carpinus fangiana Cfa02 1 CH_cfa_259 3 4 0.000100594
Cardamine hirsuta Chr2 1 CH_chi_3 16 38 3.45541e-33
Carya illinoinensis Chr08 1 CH_cil_321 4 9 0.0000305039
Carya illinoinensis Chr07 1 CH_cil_522 3 4 0.000604018
Carya illinoinensis Chr12 1 CH_cil_8 18 29 7.1052e-40
Cucumis melo chr06 1 CH_cme_158 4 13 0.0000489407
Cucumis melo chr10 1 CH_cme_22 11 71 7.04235e-16
Chenopodium quinoa C_Quinoa_Scaffold_1001 1 CH_cqu_15 12 23 8.9754e-24
Chenopodium quinoa C_Quinoa_Scaffold_2858 1 CH_cqu_16 13 43 3.2576e-22
Capsella rubella scaffold_2 1 CH_cru_11 10 21 3.762e-20
Cucumis sativus L. chr3 1 CH_csa_16 10 18 1.17611e-18
Cucumis sativus L. chr5 1 CH_csa_4 17 72 1.22557e-26
Daucus carota DCARv2_Chr1 1 CH_dca_120 5 17 0.000000180586
Daucus carota DCARv2_Chr1 1 CH_dca_95 4 4 0.0000000318494
Davidia involucrata GWHABJS00000010 1 CH_din_225 3 3 0.0000291528
Durio zibethinus NW_019168492.1 1 CH_dzi_33 6 8 0.00000000000242293
Durio zibethinus NW_019167904.1 1 CH_dzi_36 8 39 0.0000000000055157
Durio zibethinus NW_019168026.1 1 CH_dzi_40 6 10 0.0000000000181386
Durio zibethinus NW_019167960.1 1 CH_dzi_85 5 13 0.000000103892
Erigeron canadensis Conyza_canadensis_scaffold:7 1 CH_eca_221 4 15 0.0000100858
Erigeron canadensis Conyza_canadensis_scaffold:2 1 CH_eca_444 3 7 0.000428373
Eucalyptus grandis Chr08 1 CH_egr_140 7 8 4.71887e-16
Erythranthe guttata scaffold_14 1 CH_egut_167 4 4 0.000000142947
Erythranthe guttata scaffold_8 1 CH_egut_327 3 3 0.0000981511
Erythranthe guttata scaffold_3 1 CH_egut_37 8 14 0.00000000000000147936
Eutrema salsugineum scaffold_8 1 CH_esa_2 16 26 5.60569e-35
Fragaria x ananassa Fvb2-4 1 CH_fan_144 7 55 0.000000120939
Fragaria x ananassa Fvb6-1 1 CH_fan_299 6 56 0.0000153553
Fragaria vesca Fvb6 1 CH_fve_106 6 21 0.000000011916
Fragaria vesca Fvb2 1 CH_fve_205 4 6 0.00000194516
Fragaria vesca Fvb4 1 CH_fve_298 3 3 0.000095911
Gossypium hirsutum D01 1 CH_ghi_13 10 10 3.95286e-25
Gossypium hirsutum A01 1 CH_ghi_54 7 7 2.70441e-16
Glycine max Gm08 1 CH_gma_151 5 12 0.0000000513215
Glycine max Gm18 1 CH_gma_66 6 10 0.0000000000134636
Glycine max Gm15 1 CH_gma_92 6 15 0.000000000319523
Gossypium raimondii Chr02 1 CH_gra_25 7 7 7.16746e-17
Hydrangea macrophylla Hma1.2p1_0399F.1 1 CH_hma_45 4 4 0.0000000364221
Hydrangea macrophylla Hma1.2p1_0698F.1 1 CH_hma_93 3 3 0.0000327835
Lotus japonicus chr6 1 CH_lja_132 4 5 0.000000172454
Lonicera japonica GWHAAZE00000009 1 CH_lonja_312 4 9 0.0000157138
Lonicera japonica GWHAAZE00000004 1 CH_lonja_56 7 8 0.00000000000000213854
Lonicera japonica GWHAAZE00000003 1 CH_lonja_79 6 6 0.000000000000212759
Lactuca sativa Lsat_1_v8_lg_9 1 CH_lsa_241 4 9 0.00000161064
Magnolia biondii Chr19 1 CH_mbi_23 7 7 1.92724e-17
Magnolia biondii Chr15 1 CH_mbi_44 7 12 0.0000000000000152085
Magnolia biondii Chr16 1 CH_mbi_625 3 6 0.000697662
Malus domestica Chr02 1 CH_mdo_15 13 77 4.75816e-20
Malus domestica Chr14 1 CH_mdo_202 4 4 0.000000117912
Malus domestica Chr07 1 CH_mdo_31 7 8 0.00000000000000145794
Manihot esculenta Chromosome01 1 CH_mes_120 5 6 0.00000000119188
Manihot esculenta Chromosome17 1 CH_mes_175 4 4 0.000000144737
Manihot esculenta Chromosome04 1 CH_mes_317 3 3 0.00010305
Manihot esculenta Chromosome11 1 CH_mes_40 8 10 2.0203e-17
Medicago truncatula chr2 1 CH_mtr_3 21 70 1.77087e-41
Medicago truncatula chr4 1 CH_mtr_565 3 3 0.0000823187
Nelumbo nucifera chr7 1 CH_nnu_108 5 20 0.000000157068
Nelumbo nucifera chr5 1 CH_nnu_117 4 7 0.000000511821
Oryza sativa ssp. japonica chr11 1 CH_osa_104 4 5 0.0000000903624
Oryza sativa ssp. japonica chr05 1 CH_osa_183 3 3 0.0000228269
Oryza sativa ssp. japonica chr06 1 CH_osa_25 6 8 0.000000000000286382
Petunia axillaris Peaxi162Scf00267 1 CH_pax_163 3 3 0.000033376
Petunia axillaris Peaxi162Scf00154 1 CH_pax_27 6 9 0.000000000002394
Petunia axillaris Peaxi162Scf00756 1 CH_pax_39 5 6 0.00000000018723
Punica granatum NC_045127.1 1 CH_pgr_33 6 8 0.000000000000711014
Prunus persica Pp07 1 CH_ppe_360 3 3 0.0000762852
Pisum sativum chr1LG6 1 CH_psa_17 9 38 4.80595e-16
Papaver somniferum NC_039366.1 1 CH_pso_25 11 33 1.94231e-20
Papaver somniferum NC_039368.1 1 CH_pso_26 10 21 3.73336e-20
Papaver somniferum NW_020650971.1 1 CH_pso_352 4 8 0.0000076137
Populus trichocarpa Chr04 1 CH_ptr_149 5 8 0.0000000147739
Populus trichocarpa Chr01 1 CH_ptr_22 10 13 3.48402e-22
Populus trichocarpa Chr03 1 CH_ptr_337 4 12 0.0000898386
Populus trichocarpa Chr16 1 CH_ptr_344 3 3 0.000124303
Phaseolus vulgaris Chr09 1 CH_pvu_246 3 3 0.0000529991
Phaseolus vulgaris Chr06 1 CH_pvu_380 5 58 0.000309112
Quercus lobata 6 1 CH_qlo_22 12 15 6.58048e-28
Quercus lobata 12 1 CH_qlo_86 9 17 1.83662e-17
Rosa chinensis RcHm_v2.0_Chr2 1 CH_rch_18 15 58 4.13723e-27
Rosa chinensis RcHm_v2.0_Chr3 1 CH_rch_250 5 11 0.0000000517739
Rosa chinensis RcHm_v2.0_Chr6 1 CH_rch_89 7 13 0.00000000000023535
Rhododendron simsii chr08 1 CH_rsi_125 5 7 0.00000000156981
Rhododendron simsii chr10 1 CH_rsi_38 9 18 4.36003e-18
Striga asiatica scaffold1 1 CH_sas_1 11 18 4.21152e-23
Striga asiatica scaffold2 1 CH_sas_43 4 8 0.0000117737
Salvia bowleyana GWHASIU00000006 1 CH_sbo_134 6 26 0.000000060731
Salvia bowleyana GWHASIU00000001 1 CH_sbo_217 4 7 0.00000549924
Salvia bowleyana GWHASIU00000006 1 CH_sbo_31 8 11 7.07214e-17
Salvia bowleyana GWHASIU00000005 1 CH_sbo_46 8 21 0.0000000000000862512
Salix brachista GWHAAZH00000016 1 CH_sbr_30 6 6 0.000000000000312701
Salix brachista GWHAAZH00000001 1 CH_sbr_65 5 5 0.000000000225535
Salix brachista GWHAAZH00000003 1 CH_sbr_72 5 6 0.00000000135161
Sechium edule LG02 1 CH_sed_20 7 7 1.93678e-16
Sechium edule LG04 1 CH_sed_218 3 3 0.0000754316
Sequoiadendron giganteum chr10 1 CH_sgi_1179 5 35 0.00021167
Sequoiadendron giganteum chr2 1 CH_sgi_1185 3 3 0.000230763
Sequoiadendron giganteum chr10 1 CH_sgi_1186 3 3 0.000230763
Sequoiadendron giganteum chr2 1 CH_sgi_1407 3 4 0.000921831
Sequoiadendron giganteum chr10 1 CH_sgi_43 14 31 1.09578e-26
Sequoiadendron giganteum chr4 1 CH_sgi_541 5 10 0.000000170273
Sequoiadendron giganteum chr1 1 CH_sgi_97 10 16 6.2515e-20
Solanum lycopersicum SL4.0ch04 1 CH_sly_38 7 8 5.24279e-17
Schrenkiella parvula ch2-2 1 CH_spa_6 7 7 1.93253e-16
Solanum pennellii Spenn-ch04 1 CH_spe_20 7 7 1.24183e-18
Solanum tuberosum ST4.03ch04 1 CH_stu_20 8 8 5.31062e-21
Trochodendron aralioides group1 1 CH_tar_9 8 8 2.31221e-19
Theobroma cacao Chromosome_4 1 CH_tca_9 10 12 1.8017e-23
Tarenaya hassleriana NW_010967059.1 1 CH_tha_117 3 3 0.0000969218
Tarenaya hassleriana NW_010968505.1 1 CH_tha_161 3 4 0.000387257
Tarenaya hassleriana NW_010965122.1 1 CH_tha_162 3 4 0.000387257
Tarenaya hassleriana NW_010966881.1 1 CH_tha_29 5 6 0.00000000116204
Tarenaya hassleriana NW_010966177.1 1 CH_tha_53 4 4 0.000000138789
Trifolium pratense Tp57577_TGAC_v2_LG6 1 CH_tpr_190 3 3 0.0000223482
Trifolium pratense Tp57577_TGAC_v2_LG5 1 CH_tpr_70 4 4 0.000000019456
Tripterygium wilfordii NC_052249.1 1 CH_twi_134 4 7 0.00000417731
Tripterygium wilfordii NC_052248.1 1 CH_twi_15 7 7 2.36282e-16
Utricularia gibba unitig_578 1 CH_ugi_105 3 3 0.0000186178
Vaccinium macrocarpon chr11_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_119 4 4 0.000000198018
Vaccinium macrocarpon chr6_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_16 8 10 5.20866e-17
Vaccinium macrocarpon chr4_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_285 3 3 0.000118376
Vaccinium macrocarpon chr9_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_286 3 3 0.000118376
Vigna mungo CM024072.1 1 CH_vmu_10 7 7 7.2359e-17
Vigna mungo CM024073.1 1 CH_vmu_236 4 15 0.0000807361
Vigna mungo CM024074.1 1 CH_vmu_258 4 18 0.000180497
Vitis vinifera chr7 1 CH_vvi_150 4 5 0.0000000834559
Aethionema arabicum LG-10 2 CH_aar_135 3 3 0.0000817185
Aethionema arabicum LG-1 2 CH_aar_39 5 5 0.000000000168722
Aethionema arabicum LG-1 2 CH_aar_40 5 5 0.000000000168722
Acer truncatum chr6 2 CH_acertr_250 3 3 0.0000681313
Acer truncatum chr5 2 CH_acertr_27 6 7 0.000000000000894139
Actinidia chinensis Lachesis_group10 2 CH_ach_15 6 15 0.000000000430319
Actinidia chinensis Lachesis_group19 2 CH_ach_6 6 7 0.000000000000606367
Arabidopsis lyrata scaffold_2 2 CH_aly_2 16 31 3.69973e-34
Aquilegia oxysepala CHR05 2 CH_aox_201 3 3 0.000200923
Aquilegia oxysepala CHR02 2 CH_aox_41 6 14 0.00000000398782
Aquilegia oxysepala CHR05 2 CH_aox_58 6 19 0.0000000357448
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.11 2 CH_arhy_426 4 15 0.0000430982
Arabidopsis thaliana Chr1 2 CH_ath_13 9 36 4.23776e-18
Amborella trichopoda AmTr_v1.0_scaffold00010 2 CH_atr_7 15 52 1.02764e-25
Amborella trichopoda AmTr_v1.0_scaffold00126 2 CH_atr_95 4 4 0.000000268295
Brassica carinata ChrB07 2 CH_bca_117 5 7 0.000000000693402
Brassica carinata ChrC06 2 CH_bca_341 4 6 0.000000626213
Brassica carinata ChrC04 2 CH_bca_373 4 7 0.00000146022
Brassica oleracea C4 2 CH_bol_258 4 23 0.0000840043
Brassica rapa A09 2 CH_bra_86 4 5 0.0000000975694
Camellia sinensis var. sinensis Chr11 2 CH_camsi_126 5 5 0.0000000000567856
Camellia sinensis var. sinensis Chr9 2 CH_camsi_16 12 30 2.62216e-24
Camellia sinensis var. sinensis Chr12 2 CH_camsi_255 5 13 0.0000000725908
Cicer arietinum L. Ca_LG1_v3 2 CH_car_10 5 5 0.000000000119988
Cicer arietinum L. Ca_LG1_v3 2 CH_car_4 6 7 0.00000000000104497
Corylus avellana 2 2 CH_cav_159 4 6 0.00000204923
Corylus avellana 4 2 CH_cav_294 3 3 0.0000939962
Corylus avellana 1 2 CH_cav_494 3 5 0.000937837
Coffea canephora chr10 2 CH_ccan_187 3 16 0.0000350263
Ceratophyllum demersum 2 2 CH_cde_211 3 5 0.000419868
Ceratophyllum demersum 8 2 CH_cde_53 4 8 0.00000324408
Carpinus fangiana Cfa04 2 CH_cfa_198 4 16 0.0000412641
Carpinus fangiana Cfa02 2 CH_cfa_259 3 4 0.000100594
Cardamine hirsuta Chr2 2 CH_chi_3 16 38 3.45541e-33
Carya illinoinensis Chr08 2 CH_cil_321 4 9 0.0000305039
Carya illinoinensis Chr07 2 CH_cil_522 3 4 0.000604018
Carya illinoinensis Chr12 2 CH_cil_8 18 29 7.1052e-40
Cucumis melo chr06 2 CH_cme_158 4 13 0.0000489407
Cucumis melo chr10 2 CH_cme_22 11 71 7.04235e-16
Chenopodium quinoa C_Quinoa_Scaffold_1001 2 CH_cqu_15 12 23 8.9754e-24
Chenopodium quinoa C_Quinoa_Scaffold_2858 2 CH_cqu_16 13 43 3.2576e-22
Capsella rubella scaffold_2 2 CH_cru_11 10 21 3.762e-20
Cucumis sativus L. chr3 2 CH_csa_16 10 18 1.17611e-18
Cucumis sativus L. chr5 2 CH_csa_4 17 72 1.22557e-26
Daucus carota DCARv2_Chr1 2 CH_dca_120 5 17 0.000000180586
Daucus carota DCARv2_Chr1 2 CH_dca_95 4 4 0.0000000318494
Davidia involucrata GWHABJS00000010 2 CH_din_225 3 3 0.0000291528
Durio zibethinus NW_019168492.1 2 CH_dzi_33 6 8 0.00000000000242293
Durio zibethinus NW_019167904.1 2 CH_dzi_36 8 39 0.0000000000055157
Durio zibethinus NW_019168026.1 2 CH_dzi_40 6 10 0.0000000000181386
Durio zibethinus NW_019167960.1 2 CH_dzi_85 5 13 0.000000103892
Erigeron canadensis Conyza_canadensis_scaffold:7 2 CH_eca_221 4 15 0.0000100858
Erigeron canadensis Conyza_canadensis_scaffold:2 2 CH_eca_444 3 7 0.000428373
Eucalyptus grandis Chr08 2 CH_egr_140 7 8 4.71887e-16
Eucalyptus grandis Chr07 2 CH_egr_426 4 4 0.0000000549714
Eucalyptus grandis Chr02 2 CH_egr_715 4 15 0.0000743193
Erythranthe guttata scaffold_14 2 CH_egut_167 4 4 0.000000142947
Erythranthe guttata scaffold_8 2 CH_egut_327 3 3 0.0000981511
Erythranthe guttata scaffold_3 2 CH_egut_37 8 14 0.00000000000000147936
Eutrema salsugineum scaffold_8 2 CH_esa_2 16 26 5.60569e-35
Fragaria x ananassa Fvb2-4 2 CH_fan_144 7 55 0.000000120939
Fragaria x ananassa Fvb6-1 2 CH_fan_299 6 56 0.0000153553
Fragaria vesca Fvb6 2 CH_fve_106 6 21 0.000000011916
Fragaria vesca Fvb2 2 CH_fve_205 4 6 0.00000194516
Fragaria vesca Fvb4 2 CH_fve_298 3 3 0.000095911
Gossypium hirsutum D01 2 CH_ghi_13 10 10 3.95286e-25
Gossypium hirsutum A01 2 CH_ghi_54 7 7 2.70441e-16
Glycine max Gm08 2 CH_gma_151 5 12 0.0000000513215
Glycine max Gm18 2 CH_gma_66 6 10 0.0000000000134636
Glycine max Gm15 2 CH_gma_92 6 15 0.000000000319523
Gossypium raimondii Chr02 2 CH_gra_25 7 7 7.16746e-17
Hydrangea macrophylla Hma1.2p1_0399F.1 2 CH_hma_45 4 4 0.0000000364221
Hydrangea macrophylla Hma1.2p1_0698F.1 2 CH_hma_93 3 3 0.0000327835
Lotus japonicus chr6 2 CH_lja_132 4 5 0.000000172454
Lonicera japonica GWHAAZE00000009 2 CH_lonja_312 4 9 0.0000157138
Lonicera japonica GWHAAZE00000004 2 CH_lonja_56 7 8 0.00000000000000213854
Lonicera japonica GWHAAZE00000003 2 CH_lonja_79 6 6 0.000000000000212759
Lactuca sativa Lsat_1_v8_lg_9 2 CH_lsa_241 4 9 0.00000161064
Magnolia biondii Chr19 2 CH_mbi_23 7 7 1.92724e-17
Magnolia biondii Chr15 2 CH_mbi_44 7 12 0.0000000000000152085
Magnolia biondii Chr16 2 CH_mbi_625 3 6 0.000697662
Malus domestica Chr02 2 CH_mdo_15 13 77 4.75816e-20
Malus domestica Chr14 2 CH_mdo_202 4 4 0.000000117912
Malus domestica Chr07 2 CH_mdo_31 7 8 0.00000000000000145794
Manihot esculenta Chromosome01 2 CH_mes_120 5 6 0.00000000119188
Manihot esculenta Chromosome17 2 CH_mes_175 4 4 0.000000144737
Manihot esculenta Chromosome04 2 CH_mes_317 3 3 0.00010305
Manihot esculenta Chromosome11 2 CH_mes_40 8 10 2.0203e-17
Nelumbo nucifera chr7 2 CH_nnu_108 5 20 0.000000157068
Nelumbo nucifera chr5 2 CH_nnu_117 4 7 0.000000511821
Oryza sativa ssp. japonica chr11 2 CH_osa_104 4 5 0.0000000903624
Oryza sativa ssp. japonica chr05 2 CH_osa_183 3 3 0.0000228269
Oryza sativa ssp. japonica chr06 2 CH_osa_25 6 8 0.000000000000286382
Petunia axillaris Peaxi162Scf00267 2 CH_pax_163 3 3 0.000033376
Petunia axillaris Peaxi162Scf00154 2 CH_pax_27 6 9 0.000000000002394
Petunia axillaris Peaxi162Scf00756 2 CH_pax_39 5 6 0.00000000018723
Punica granatum NC_045127.1 2 CH_pgr_33 6 8 0.000000000000711014
Prunus persica Pp07 2 CH_ppe_360 3 3 0.0000762852
Pisum sativum chr1LG6 2 CH_psa_17 9 38 4.80595e-16
Papaver somniferum NC_039366.1 2 CH_pso_25 11 33 1.94231e-20
Papaver somniferum NC_039368.1 2 CH_pso_26 10 21 3.73336e-20
Papaver somniferum NW_020650971.1 2 CH_pso_352 4 8 0.0000076137
Populus trichocarpa Chr04 2 CH_ptr_149 5 8 0.0000000147739
Populus trichocarpa Chr01 2 CH_ptr_22 10 13 3.48402e-22
Populus trichocarpa Chr03 2 CH_ptr_337 4 12 0.0000898386
Populus trichocarpa Chr16 2 CH_ptr_344 3 3 0.000124303
Phaseolus vulgaris Chr09 2 CH_pvu_246 3 3 0.0000529991
Phaseolus vulgaris Chr06 2 CH_pvu_380 5 58 0.000309112
Quercus lobata 6 2 CH_qlo_22 12 15 6.58048e-28
Quercus lobata 12 2 CH_qlo_86 9 17 1.83662e-17
Rosa chinensis RcHm_v2.0_Chr2 2 CH_rch_18 15 58 4.13723e-27
Rosa chinensis RcHm_v2.0_Chr3 2 CH_rch_250 5 11 0.0000000517739
Rosa chinensis RcHm_v2.0_Chr6 2 CH_rch_89 7 13 0.00000000000023535
Rhododendron simsii chr08 2 CH_rsi_125 5 7 0.00000000156981
Rhododendron simsii chr10 2 CH_rsi_38 9 18 4.36003e-18
Striga asiatica scaffold1 2 CH_sas_1 11 18 4.21152e-23
Striga asiatica scaffold2 2 CH_sas_43 4 8 0.0000117737
Salvia bowleyana GWHASIU00000006 2 CH_sbo_134 6 26 0.000000060731
Salvia bowleyana GWHASIU00000001 2 CH_sbo_217 4 7 0.00000549924
Salvia bowleyana GWHASIU00000006 2 CH_sbo_31 8 11 7.07214e-17
Salvia bowleyana GWHASIU00000005 2 CH_sbo_46 8 21 0.0000000000000862512
Salix brachista GWHAAZH00000016 2 CH_sbr_30 6 6 0.000000000000312701
Salix brachista GWHAAZH00000001 2 CH_sbr_65 5 5 0.000000000225535
Salix brachista GWHAAZH00000003 2 CH_sbr_72 5 6 0.00000000135161
Sechium edule LG02 2 CH_sed_20 7 7 1.93678e-16
Sechium edule LG04 2 CH_sed_218 3 3 0.0000754316
Sequoiadendron giganteum chr10 2 CH_sgi_1179 5 35 0.00021167
Sequoiadendron giganteum chr2 2 CH_sgi_1185 3 3 0.000230763
Sequoiadendron giganteum chr10 2 CH_sgi_1186 3 3 0.000230763
Sequoiadendron giganteum chr2 2 CH_sgi_1407 3 4 0.000921831
Sequoiadendron giganteum chr10 2 CH_sgi_43 14 31 1.09578e-26
Sequoiadendron giganteum chr4 2 CH_sgi_541 5 10 0.000000170273
Sequoiadendron giganteum chr1 2 CH_sgi_97 10 16 6.2515e-20
Solanum lycopersicum SL4.0ch04 2 CH_sly_38 7 8 5.24279e-17
Schrenkiella parvula ch2-2 2 CH_spa_6 7 7 1.93253e-16
Solanum pennellii Spenn-ch04 2 CH_spe_20 7 7 1.24183e-18
Solanum tuberosum ST4.03ch04 2 CH_stu_20 8 8 5.31062e-21
Trochodendron aralioides group1 2 CH_tar_9 8 8 2.31221e-19
Theobroma cacao Chromosome_4 2 CH_tca_9 10 12 1.8017e-23
Tarenaya hassleriana NW_010967059.1 2 CH_tha_117 3 3 0.0000969218
Tarenaya hassleriana NW_010968505.1 2 CH_tha_161 3 4 0.000387257
Tarenaya hassleriana NW_010965122.1 2 CH_tha_162 3 4 0.000387257
Tarenaya hassleriana NW_010966881.1 2 CH_tha_29 5 6 0.00000000116204
Tarenaya hassleriana NW_010966177.1 2 CH_tha_53 4 4 0.000000138789
Trifolium pratense Tp57577_TGAC_v2_LG6 2 CH_tpr_190 3 3 0.0000223482
Trifolium pratense Tp57577_TGAC_v2_LG5 2 CH_tpr_70 4 4 0.000000019456
Tripterygium wilfordii NC_052249.1 2 CH_twi_134 4 7 0.00000417731
Tripterygium wilfordii NC_052248.1 2 CH_twi_15 7 7 2.36282e-16
Utricularia gibba unitig_578 2 CH_ugi_105 3 3 0.0000186178
Vaccinium macrocarpon chr11_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_119 4 4 0.000000198018
Vaccinium macrocarpon chr6_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_16 8 10 5.20866e-17
Vaccinium macrocarpon chr4_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_285 3 3 0.000118376
Vaccinium macrocarpon chr9_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_286 3 3 0.000118376
Vigna mungo CM024072.1 2 CH_vmu_10 7 7 7.2359e-17
Vigna mungo CM024073.1 2 CH_vmu_236 4 15 0.0000807361
Vigna mungo CM024074.1 2 CH_vmu_258 4 18 0.000180497
Vitis vinifera chr7 2 CH_vvi_150 4 5 0.0000000834559

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001