Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.organelle machinery.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factor components.component PRIN2

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Camellia sinensis var. sinensis Chr10 1 CH_camsi_401 3 20 0.00000359422
Citrullus lanatus CG_Chr05 1 CH_cla_190 2 4 0.000532222
Cucumis melo chr10 1 CH_cme_268 2 4 0.00040024
Cucumis sativus L. chr5 1 CH_csa_318 2 5 0.000834655
Durio zibethinus NW_019168048.1 1 CH_dzi_396 2 7 0.000973213
Lactuca sativa Lsat_1_v8_lg_3 1 CH_lsa_369 2 3 0.000154198
Magnolia biondii Chr15 1 CH_mbi_478 3 64 0.000147192
Malus domestica Chr16 1 CH_mdo_600 2 3 0.00034128
Medicago truncatula chr8 1 CH_mtr_578 2 3 0.000123256
Phaseolus vulgaris Chr03 1 CH_pvu_384 2 4 0.000440804
Quercus lobata 3 1 CH_qlo_476 3 11 0.000000659603
Rhododendron simsii chr12 1 CH_rsi_475 2 4 0.000387159
Sechium edule LG06 1 CH_sed_283 2 4 0.000428021
Solanum pennellii Spenn-ch05 1 CH_spe_558 2 7 0.000933956
Camellia sinensis var. sinensis Chr10 2 CH_camsi_401 3 20 0.00000359422
Citrullus lanatus CG_Chr05 2 CH_cla_190 2 4 0.000532222
Cucumis melo chr10 2 CH_cme_268 2 4 0.00040024
Cucumis sativus L. chr5 2 CH_csa_318 2 5 0.000834655
Durio zibethinus NW_019168048.1 2 CH_dzi_396 2 7 0.000973213
Lactuca sativa Lsat_1_v8_lg_3 2 CH_lsa_369 2 3 0.000154198
Magnolia biondii Chr15 2 CH_mbi_478 3 64 0.000147192
Malus domestica Chr16 2 CH_mdo_600 2 3 0.00034128
Phaseolus vulgaris Chr03 2 CH_pvu_384 2 4 0.000440804
Quercus lobata 3 2 CH_qlo_476 3 11 0.000000659603
Rhododendron simsii chr12 2 CH_rsi_475 2 4 0.000387159
Sechium edule LG06 2 CH_sed_283 2 4 0.000428021
Solanum pennellii Spenn-ch05 2 CH_spe_558 2 7 0.000933956

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001