Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.organelle machinery.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essential co-factor components.component PAP5/TAC12

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Avicennia marina ScioBoG_19538_HRSCAF_19626 1 CH_ama_79 2 2 0.000258665
Carica papaya supercontig_17 1 CH_cpa_162 2 2 0.0000950661
Malus domestica Chr05 1 CH_mdo_435 2 2 0.000113763
Sechium edule LG10 1 CH_sed_282 2 4 0.000428021
Vanilla planifolia CM028150.1 1 CH_vpl_144 2 2 0.000073888
Avicennia marina ScioBoG_19538_HRSCAF_19626 2 CH_ama_79 2 2 0.000258665
Carica papaya supercontig_17 2 CH_cpa_162 2 2 0.0000950661
Malus domestica Chr05 2 CH_mdo_435 2 2 0.000113763
Sechium edule LG10 2 CH_sed_282 2 4 0.000428021
Vanilla planifolia CM028150.1 2 CH_vpl_144 2 2 0.000073888

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001