Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (ERF)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr5 1 CH_acertr_150 4 4 0.000000332438
Acer truncatum chr5 1 CH_acertr_373 3 3 0.000184914
Acer truncatum chr4 1 CH_acertr_374 3 3 0.000184914
Acer truncatum chr1 1 CH_acertr_375 3 3 0.000184914
Actinidia chinensis Lachesis_group23 1 CH_ach_57 4 4 0.00000181034
Arabidopsis lyrata scaffold_3 1 CH_aly_340 3 3 0.000272278
Avicennia marina ScioBoG_14204_HRSCAF_14270 1 CH_ama_130 3 3 0.000693595
Avicennia marina ScioBoG_8578_HRSCAF_8617 1 CH_ama_131 3 3 0.000693595
Avicennia marina ScioBoG_102831_HRSCAF_103044 1 CH_ama_132 3 3 0.000693595
Avicennia marina ScioBoG_11560_HRSCAF_11609 1 CH_ama_133 3 3 0.000693595
Amaranthus hybridus AmaHy_arrow1_Scaffold_4 1 CH_amhyb_167 3 3 0.000105011
Aquilegia oxysepala CHR03 1 CH_aox_330 3 5 0.000748071
Arabidopsis thaliana Chr3 1 CH_ath_244 3 3 0.0000488915
Amborella trichopoda AmTr_v1.0_scaffold00009 1 CH_atr_225 3 4 0.000170061
Brassica carinata ChrB04 1 CH_bca_1186 3 3 0.000984161
Beta vulgaris Chr6_EL10_PGA_scaffold0 1 CH_bvu_202 3 3 0.0000867401
Beta vulgaris Chr3_EL10_PGA_scaffold7 1 CH_bvu_246 3 4 0.000346569
Camellia sinensis var. sinensis Chr1 1 CH_camsi_118 8 29 0.0000000000268358
Camellia sinensis var. sinensis Chr14 1 CH_camsi_753 3 3 0.000311526
Camellia sinensis var. sinensis Chr7 1 CH_camsi_890 4 15 0.000786328
Cannabis sativa NC_044373.1 1 CH_cansat_127 4 4 0.000000360406
Cannabis sativa NC_044374.1 1 CH_cansat_156 4 5 0.00000179942
Cannabis sativa NC_044376.1 1 CH_cansat_385 3 4 0.000797186
Cannabis sativa NC_044371.1 1 CH_cansat_77 6 11 0.000000000509975
Capsicum annuum PGAv.1.6.scaffold222 1 CH_can_304 4 9 0.000125697
Capsicum annuum PGAv.1.6.scaffold793 1 CH_can_374 3 3 0.000406528
Capsicum annuum PGAv.1.6.scaffold379 1 CH_can_47 8 16 0.000000000000405862
Cicer arietinum L. Ca_LG4_v3 1 CH_car_248 3 3 0.00036084
Cicer arietinum L. Ca_LG3_v3 1 CH_car_92 4 5 0.00000420505
Corylus avellana 4 1 CH_cav_143 4 4 0.000000805454
Corylus avellana 9 1 CH_cav_57 6 10 0.000000000844341
Corylus avellana 8 1 CH_cav_76 5 6 0.000000010911
Citrus clementina scaffold_3 1 CH_ccl_235 4 6 0.0000138046
Citrus clementina scaffold_9 1 CH_ccl_416 4 11 0.000300761
Citrus clementina scaffold_9 1 CH_ccl_426 3 3 0.000381757
Citrus clementina scaffold_3 1 CH_ccl_98 5 5 0.00000000219813
Carpinus fangiana Cfa05 1 CH_cfa_257 3 3 0.0000987731
Carpinus fangiana Cfa01 1 CH_cfa_258 3 3 0.0000987731
Cardamine hirsuta Chr3 1 CH_chi_331 3 3 0.00025793
Carya illinoinensis Chr08 1 CH_cil_275 4 4 0.00000315881
Carya illinoinensis Chr11 1 CH_cil_311 4 5 0.0000157548
Cucumis melo chr06 1 CH_cme_265 3 3 0.000349771
Carica papaya supercontig_44 1 CH_cpa_359 3 4 0.000577259
Carica papaya supercontig_151 1 CH_cpa_360 3 4 0.000577259
Chenopodium quinoa C_Quinoa_Scaffold_4480 1 CH_cqu_332 3 3 0.0000985383
Chenopodium quinoa C_Quinoa_Scaffold_2933 1 CH_cqu_333 3 3 0.0000985383
Capsella rubella scaffold_3 1 CH_cru_352 3 3 0.000384155
Cucumis sativus L. chr3 1 CH_csa_307 3 3 0.000623404
Daucus carota DCARv2_Chr3 1 CH_dca_449 3 3 0.000692917
Davidia involucrata GWHABJS00000003 1 CH_din_292 4 9 0.000114469
Davidia involucrata GWHABJS00000007 1 CH_din_439 3 3 0.000426089
Davidia involucrata GWHABJS00000014 1 CH_din_440 3 3 0.000426089
Durio zibethinus NW_019167893.1 1 CH_dzi_142 4 4 0.0000028024
Durio zibethinus NW_019167893.1 1 CH_dzi_143 4 4 0.0000028024
Durio zibethinus NW_019167838.1 1 CH_dzi_413 3 3 0.000999344
Durio zibethinus NW_019167827.1 1 CH_dzi_414 3 3 0.000999344
Durio zibethinus NW_019167904.1 1 CH_dzi_415 3 3 0.000999344
Durio zibethinus NW_019168381.1 1 CH_dzi_416 3 3 0.000999344
Erigeron canadensis Conyza_canadensis_scaffold:1 1 CH_eca_170 4 4 0.000000523032
Erigeron canadensis Conyza_canadensis_scaffold:3 1 CH_eca_410 3 3 0.00028779
Erigeron canadensis Conyza_canadensis_scaffold:5 1 CH_eca_411 3 3 0.00028779
Erigeron canadensis Conyza_canadensis_scaffold:7 1 CH_eca_412 3 3 0.00028779
Eucalyptus grandis Chr07 1 CH_egr_133 8 10 1.47246e-16
Erythranthe guttata scaffold_6 1 CH_egut_387 3 3 0.000232712
Erythranthe guttata scaffold_5 1 CH_egut_388 3 3 0.000232712
Erythranthe guttata scaffold_4 1 CH_egut_389 3 3 0.000232712
Eutrema salsugineum scaffold_13 1 CH_esa_268 3 3 0.00031306
Fragaria x ananassa Fvb2-1 1 CH_fan_124 5 6 0.000000050152
Fragaria x ananassa Fvb7-2 1 CH_fan_246 5 11 0.00000382372
Fragaria x ananassa Fvb7-2 1 CH_fan_306 4 5 0.0000176466
Fragaria x ananassa Fvb7-2 1 CH_fan_307 4 5 0.0000176466
Fragaria x ananassa Fvb2-3 1 CH_fan_308 4 5 0.0000176466
Fragaria x ananassa Fvb7-1 1 CH_fan_402 4 7 0.000123056
Fragaria x ananassa Fvb2-4 1 CH_fan_403 4 7 0.000123056
Fragaria x ananassa Fvb2-2 1 CH_fan_49 6 6 0.0000000000197596
Fragaria vesca Fvb7 1 CH_fve_230 4 7 0.0000119259
Fragaria vesca Fvb4 1 CH_fve_365 3 3 0.000196882
Fragaria vesca Fvb7 1 CH_fve_366 3 3 0.000196882
Fragaria vesca Fvb2 1 CH_fve_79 5 5 0.000000000584616
Gossypium hirsutum D07 1 CH_ghi_155 6 7 0.000000000823599
Gossypium hirsutum A07 1 CH_ghi_172 6 8 0.00000000328485
Gossypium hirsutum A08 1 CH_ghi_407 4 4 0.0000103008
Gossypium hirsutum D09 1 CH_ghi_408 4 4 0.0000103008
Gossypium hirsutum D08 1 CH_ghi_409 4 4 0.0000103008
Glycine max Gm10 1 CH_gma_257 4 4 0.00000577599
Glycine max Gm03 1 CH_gma_587 4 9 0.000718473
Glycine max Gm13 1 CH_gma_61 7 9 0.0000000000065842
Gossypium raimondii Chr04 1 CH_gra_199 4 4 0.00000630272
Gossypium raimondii Chr06 1 CH_gra_200 4 4 0.00000630272
Gossypium raimondii Chr01 1 CH_gra_92 6 8 0.00000000217988
Helianthus annuus HanXRQChr04 1 CH_han_168 9 65 0.00000000142809
Helianthus annuus HanXRQChr14 1 CH_han_296 4 4 0.00000119686
Helianthus annuus HanXRQChr09 1 CH_han_655 4 11 0.000390191
Hydrangea macrophylla Hma1.2p1_0200F.1 1 CH_hma_104 3 3 0.0000832084
Hydrangea macrophylla Hma1.2p1_0267F.1 1 CH_hma_105 3 3 0.0000832084
Lupinus albus Lalb_Chr02 1 CH_lal_118 4 4 0.00000191754
Lotus japonicus chr5 1 CH_lja_48 6 6 0.0000000000126458
Lonicera japonica GWHAAZE00000002 1 CH_lonja_243 4 4 0.000000872073
Lonicera japonica GWHAAZE00000008 1 CH_lonja_566 3 3 0.000393541
Lonicera japonica GWHAAZE00000002 1 CH_lonja_567 3 3 0.000393541
Lactuca sativa Lsat_1_v8_lg_4 1 CH_lsa_263 4 5 0.00000474217
Lactuca sativa Lsat_1_v8_lg_6 1 CH_lsa_316 4 7 0.0000330789
Magnolia biondii Chr18 1 CH_mbi_649 4 29 0.000811418
Malus domestica Chr01 1 CH_mdo_662 3 3 0.000404363
Malus domestica Chr05 1 CH_mdo_663 3 3 0.000404363
Manihot esculenta Chromosome06 1 CH_mes_475 3 3 0.000850707
Manihot esculenta Chromosome05 1 CH_mes_476 3 3 0.000850707
Manihot esculenta Chromosome03 1 CH_mes_477 3 3 0.000850707
Manihot esculenta Chromosome15 1 CH_mes_478 3 3 0.000850707
Manihot esculenta Chromosome13 1 CH_mes_479 3 3 0.000850707
Medicago truncatula chr7 1 CH_mtr_349 5 11 0.000000630349
Medicago truncatula chr4 1 CH_mtr_451 4 6 0.0000107812
Medicago truncatula chr1 1 CH_mtr_57 9 16 1.8614e-16
Medicago truncatula chr1 1 CH_mtr_645 4 10 0.000150004
Nelumbo nucifera chr3 1 CH_nnu_297 3 3 0.000079049
Nelumbo nucifera chr1 1 CH_nnu_47 5 5 0.000000000103554
Nicotiana tabacum Nitab4.5_0000876 1 CH_nta_154 3 3 0.000399151
Nicotiana tabacum Nitab4.5_0000436 1 CH_nta_155 3 3 0.000399151
Nicotiana tabacum Nitab4.5_0002211 1 CH_nta_53 4 4 0.00000107316
Nicotiana tabacum Nitab4.5_0001088 1 CH_nta_54 4 4 0.00000107316
Olea europaea chr19 1 CH_oeu_340 3 3 0.000407251
Olea europaea chr16 1 CH_oeu_341 3 3 0.000407251
Petunia axillaris Peaxi162Scf00271 1 CH_pax_120 4 4 0.00000095804
Petunia axillaris Peaxi162Scf00078 1 CH_pax_149 4 6 0.0000143163
Petunia axillaris Peaxi162Scf00024 1 CH_pax_287 3 3 0.000406452
Petunia axillaris Peaxi162Scf00167 1 CH_pax_288 3 3 0.000406452
Punica granatum NC_045130.1 1 CH_pgr_301 3 3 0.000423272
Prunus persica Pp02 1 CH_ppe_126 5 5 0.000000000972614
Prunus persica Pp02 1 CH_ppe_425 3 3 0.000244239
Prunus persica Pp01 1 CH_ppe_426 3 3 0.000244239
Prunus persica Pp08 1 CH_ppe_427 3 3 0.000244239
Pisum sativum chr3LG5 1 CH_psa_149 4 5 0.00000153256
Populus trichocarpa Chr02 1 CH_ptr_234 4 4 0.0000020928
Populus trichocarpa Chr14 1 CH_ptr_263 4 5 0.0000104409
Populus trichocarpa Chr01 1 CH_ptr_522 3 3 0.000762218
Populus trichocarpa Chr03 1 CH_ptr_523 3 3 0.000762218
Populus trichocarpa Chr05 1 CH_ptr_524 3 3 0.000762218
Populus trichocarpa Chr08 1 CH_ptr_525 3 3 0.000762218
Phaseolus vulgaris Chr07 1 CH_pvu_146 5 7 0.000000178918
Phaseolus vulgaris Chr01 1 CH_pvu_228 4 5 0.00001384
Phaseolus vulgaris Chr07 1 CH_pvu_481 3 3 0.000888604
Quercus lobata 10 1 CH_qlo_1000 3 4 0.000730959
Quercus lobata 9 1 CH_qlo_1001 3 4 0.000730959
Quercus lobata 4 1 CH_qlo_513 4 5 0.00000148594
Quercus lobata 6 1 CH_qlo_603 4 8 0.0000207218
Quercus lobata 6 1 CH_qlo_838 3 3 0.000182968
Quercus lobata 9 1 CH_qlo_839 3 3 0.000182968
Rosa chinensis RcHm_v2.0_Chr2 1 CH_rch_166 6 13 0.000000000602639
Rosa chinensis RcHm_v2.0_Chr1 1 CH_rch_180 5 6 0.00000000158861
Rosa chinensis RcHm_v2.0_Chr1 1 CH_rch_623 3 3 0.000142176
Rosa chinensis RcHm_v2.0_Chr6 1 CH_rch_95 6 6 0.000000000000354023
Rhododendron simsii chr07 1 CH_rsi_138 6 12 0.00000000463166
Rhododendron simsii chr01 1 CH_rsi_261 4 5 0.00000489056
Rhododendron simsii chr03 1 CH_rsi_509 3 3 0.000421796
Striga asiatica scaffold60 1 CH_sas_138 3 4 0.000614863
Salvia bowleyana GWHASIU00000008 1 CH_sbo_102 5 6 0.00000000233125
Salvia bowleyana GWHASIU00000007 1 CH_sbo_355 3 3 0.000169977
Salvia bowleyana GWHASIU00000003 1 CH_sbo_445 3 4 0.000679115
Salix brachista GWHAAZH00000002 1 CH_sbr_148 4 4 0.0000020064
Salix brachista GWHAAZH00000003 1 CH_sbr_400 3 3 0.000723604
Salix brachista GWHAAZH00000005 1 CH_sbr_401 3 3 0.000723604
Salix brachista GWHAAZH00000008 1 CH_sbr_402 3 3 0.000723604
Salix brachista GWHAAZH00000001 1 CH_sbr_403 3 3 0.000723604
Salix brachista GWHAAZH00000003 1 CH_sbr_64 7 14 0.000000000134785
Sequoiadendron giganteum chr4 1 CH_sgi_1337 3 5 0.000504341
Sequoiadendron giganteum chr4 1 CH_sgi_191 7 13 0.0000000000000815823
Sequoiadendron giganteum chr9 1 CH_sgi_671 4 10 0.0000107991
Sequoiadendron giganteum chr4 1 CH_sgi_973 3 3 0.000050514
Solanum lycopersicum SL4.0ch03 1 CH_sly_198 4 4 0.0000011148
Solanum lycopersicum SL4.0ch09 1 CH_sly_497 3 3 0.000474808
Solanum lycopersicum SL4.0ch09 1 CH_sly_498 3 3 0.000474808
Solanum lycopersicum SL4.0ch08 1 CH_sly_499 3 3 0.000474808
Solanum lycopersicum SL4.0ch05 1 CH_sly_500 3 3 0.000474808
Solanum lycopersicum SL4.0ch03 1 CH_sly_501 3 3 0.000474808
Schrenkiella parvula ch1-1 1 CH_spa_242 3 3 0.000369269
Schrenkiella parvula ch3-1 1 CH_spa_243 3 3 0.000369269
Solanum pennellii Spenn-ch03 1 CH_spe_153 5 9 0.000000113525
Solanum pennellii Spenn-ch11 1 CH_spe_450 3 3 0.000282769
Solanum pennellii Spenn-ch05 1 CH_spe_451 3 3 0.000282769
Solanum pennellii Spenn-ch03 1 CH_spe_452 3 3 0.000282769
Solanum pennellii Spenn-ch08 1 CH_spe_453 3 3 0.000282769
Solanum tuberosum ST4.03ch01 1 CH_stu_235 4 4 0.00000112815
Solanum tuberosum ST4.03ch03 1 CH_stu_288 4 5 0.00000563042
Solanum tuberosum ST4.03ch03 1 CH_stu_550 3 3 0.000494687
Solanum tuberosum ST4.03ch11 1 CH_stu_551 3 3 0.000494687
Solanum tuberosum ST4.03ch05 1 CH_stu_552 3 3 0.000494687
Solanum tuberosum ST4.03ch08 1 CH_stu_553 3 3 0.000494687
Solanum tuberosum ST4.03ch01 1 CH_stu_620 4 13 0.000793443
Trochodendron aralioides group17 1 CH_tar_539 3 3 0.000748376
Trochodendron aralioides group2 1 CH_tar_540 3 3 0.000748376
Trochodendron aralioides group0 1 CH_tar_57 6 8 0.000000000425215
Trochodendron aralioides group12 1 CH_tar_82 5 5 0.0000000056466
Trochodendron aralioides group15 1 CH_tar_83 5 5 0.0000000056466
Theobroma cacao Chromosome_1 1 CH_tca_184 4 4 0.000000615091
Theobroma cacao Chromosome_1 1 CH_tca_220 4 5 0.0000030702
Theobroma cacao Chromosome_4 1 CH_tca_369 3 3 0.00028958
Tarenaya hassleriana NW_010964923.1 1 CH_tha_193 3 3 0.000624386
Trifolium pratense Tp57577_TGAC_v2_LG1 1 CH_tpr_187 4 7 0.0000192283
Tripterygium wilfordii NC_052241.1 1 CH_twi_124 4 4 0.00000289226
Tripterygium wilfordii NC_052245.1 1 CH_twi_325 3 3 0.000978783
Tripterygium wilfordii NC_052232.1 1 CH_twi_326 3 3 0.000978783
Tripterygium wilfordii NC_052243.1 1 CH_twi_77 5 5 0.00000000846608
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_134 4 4 0.00000060163
Vaccinium macrocarpon chr8_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_298 3 3 0.000269743
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_299 3 3 0.000269743
Vaccinium macrocarpon chr9_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_300 3 3 0.000269743
Vigna mungo CM024071.1 1 CH_vmu_106 5 8 0.000000284907
Vigna mungo CM024071.1 1 CH_vmu_407 3 3 0.000687241
Vigna mungo CM024071.1 1 CH_vmu_408 3 3 0.000687241
Vigna mungo CM024070.1 1 CH_vmu_56 5 5 0.00000000512238
Vitis vinifera chr7 1 CH_vvi_171 4 4 0.000000304078
Vitis vinifera chr16 1 CH_vvi_20 12 23 1.86844e-23
Vitis vinifera chr15 1 CH_vvi_304 3 3 0.000170102
Acer truncatum chr5 2 CH_acertr_150 4 4 0.000000332438
Acer truncatum chr5 2 CH_acertr_373 3 3 0.000184914
Acer truncatum chr4 2 CH_acertr_374 3 3 0.000184914
Acer truncatum chr1 2 CH_acertr_375 3 3 0.000184914
Actinidia chinensis Lachesis_group23 2 CH_ach_57 4 4 0.00000181034
Arabidopsis lyrata scaffold_3 2 CH_aly_340 3 3 0.000272278
Avicennia marina ScioBoG_14204_HRSCAF_14270 2 CH_ama_130 3 3 0.000693595
Avicennia marina ScioBoG_8578_HRSCAF_8617 2 CH_ama_131 3 3 0.000693595
Avicennia marina ScioBoG_102831_HRSCAF_103044 2 CH_ama_132 3 3 0.000693595
Avicennia marina ScioBoG_11560_HRSCAF_11609 2 CH_ama_133 3 3 0.000693595
Amaranthus hybridus AmaHy_arrow1_Scaffold_4 2 CH_amhyb_167 3 3 0.000105011
Aquilegia oxysepala CHR03 2 CH_aox_330 3 5 0.000748071
Arabidopsis thaliana Chr3 2 CH_ath_244 3 3 0.0000488915
Amborella trichopoda AmTr_v1.0_scaffold00009 2 CH_atr_225 3 4 0.000170061
Brassica carinata ChrB04 2 CH_bca_1186 3 3 0.000984161
Beta vulgaris Chr6_EL10_PGA_scaffold0 2 CH_bvu_202 3 3 0.0000867401
Beta vulgaris Chr3_EL10_PGA_scaffold7 2 CH_bvu_246 3 4 0.000346569
Camellia sinensis var. sinensis Chr1 2 CH_camsi_118 8 29 0.0000000000268358
Camellia sinensis var. sinensis Chr14 2 CH_camsi_753 3 3 0.000311526
Camellia sinensis var. sinensis Chr7 2 CH_camsi_890 4 15 0.000786328
Cannabis sativa NC_044373.1 2 CH_cansat_127 4 4 0.000000360406
Cannabis sativa NC_044374.1 2 CH_cansat_156 4 5 0.00000179942
Cannabis sativa NC_044376.1 2 CH_cansat_385 3 4 0.000797186
Cannabis sativa NC_044371.1 2 CH_cansat_77 6 11 0.000000000509975
Capsicum annuum PGAv.1.6.scaffold222 2 CH_can_304 4 9 0.000125697
Capsicum annuum PGAv.1.6.scaffold793 2 CH_can_374 3 3 0.000406528
Capsicum annuum PGAv.1.6.scaffold379 2 CH_can_47 8 16 0.000000000000405862
Cicer arietinum L. Ca_LG4_v3 2 CH_car_248 3 3 0.00036084
Cicer arietinum L. Ca_LG3_v3 2 CH_car_92 4 5 0.00000420505
Corylus avellana 4 2 CH_cav_143 4 4 0.000000805454
Corylus avellana 9 2 CH_cav_57 6 10 0.000000000844341
Corylus avellana 8 2 CH_cav_76 5 6 0.000000010911
Citrus clementina scaffold_3 2 CH_ccl_235 4 6 0.0000138046
Citrus clementina scaffold_9 2 CH_ccl_416 4 11 0.000300761
Citrus clementina scaffold_9 2 CH_ccl_426 3 3 0.000381757
Citrus clementina scaffold_3 2 CH_ccl_98 5 5 0.00000000219813
Carpinus fangiana Cfa05 2 CH_cfa_257 3 3 0.0000987731
Carpinus fangiana Cfa01 2 CH_cfa_258 3 3 0.0000987731
Cardamine hirsuta Chr3 2 CH_chi_331 3 3 0.00025793
Carya illinoinensis Chr08 2 CH_cil_275 4 4 0.00000315881
Carya illinoinensis Chr11 2 CH_cil_311 4 5 0.0000157548
Cucumis melo chr06 2 CH_cme_265 3 3 0.000349771
Carica papaya supercontig_44 2 CH_cpa_359 3 4 0.000577259
Carica papaya supercontig_151 2 CH_cpa_360 3 4 0.000577259
Chenopodium quinoa C_Quinoa_Scaffold_4480 2 CH_cqu_332 3 3 0.0000985383
Chenopodium quinoa C_Quinoa_Scaffold_2933 2 CH_cqu_333 3 3 0.0000985383
Capsella rubella scaffold_3 2 CH_cru_352 3 3 0.000384155
Cucumis sativus L. chr3 2 CH_csa_307 3 3 0.000623404
Daucus carota DCARv2_Chr3 2 CH_dca_449 3 3 0.000692917
Davidia involucrata GWHABJS00000003 2 CH_din_292 4 9 0.000114469
Davidia involucrata GWHABJS00000007 2 CH_din_439 3 3 0.000426089
Davidia involucrata GWHABJS00000014 2 CH_din_440 3 3 0.000426089
Durio zibethinus NW_019167893.1 2 CH_dzi_142 4 4 0.0000028024
Durio zibethinus NW_019167893.1 2 CH_dzi_143 4 4 0.0000028024
Durio zibethinus NW_019167838.1 2 CH_dzi_413 3 3 0.000999344
Durio zibethinus NW_019167827.1 2 CH_dzi_414 3 3 0.000999344
Durio zibethinus NW_019167904.1 2 CH_dzi_415 3 3 0.000999344
Durio zibethinus NW_019168381.1 2 CH_dzi_416 3 3 0.000999344
Erigeron canadensis Conyza_canadensis_scaffold:1 2 CH_eca_170 4 4 0.000000523032
Erigeron canadensis Conyza_canadensis_scaffold:3 2 CH_eca_410 3 3 0.00028779
Erigeron canadensis Conyza_canadensis_scaffold:5 2 CH_eca_411 3 3 0.00028779
Erigeron canadensis Conyza_canadensis_scaffold:7 2 CH_eca_412 3 3 0.00028779
Eucalyptus grandis Chr07 2 CH_egr_133 8 10 1.47246e-16
Eucalyptus grandis Chr08 2 CH_egr_926 3 4 0.000855164
Erythranthe guttata scaffold_6 2 CH_egut_387 3 3 0.000232712
Erythranthe guttata scaffold_5 2 CH_egut_388 3 3 0.000232712
Erythranthe guttata scaffold_4 2 CH_egut_389 3 3 0.000232712
Eutrema salsugineum scaffold_13 2 CH_esa_268 3 3 0.00031306
Fragaria x ananassa Fvb2-1 2 CH_fan_124 5 6 0.000000050152
Fragaria x ananassa Fvb7-2 2 CH_fan_246 5 11 0.00000382372
Fragaria x ananassa Fvb7-2 2 CH_fan_306 4 5 0.0000176466
Fragaria x ananassa Fvb7-2 2 CH_fan_307 4 5 0.0000176466
Fragaria x ananassa Fvb2-3 2 CH_fan_308 4 5 0.0000176466
Fragaria x ananassa Fvb7-1 2 CH_fan_402 4 7 0.000123056
Fragaria x ananassa Fvb2-4 2 CH_fan_403 4 7 0.000123056
Fragaria x ananassa Fvb2-2 2 CH_fan_49 6 6 0.0000000000197596
Fragaria vesca Fvb7 2 CH_fve_230 4 7 0.0000119259
Fragaria vesca Fvb4 2 CH_fve_365 3 3 0.000196882
Fragaria vesca Fvb7 2 CH_fve_366 3 3 0.000196882
Fragaria vesca Fvb2 2 CH_fve_79 5 5 0.000000000584616
Gossypium hirsutum D07 2 CH_ghi_155 6 7 0.000000000823599
Gossypium hirsutum A07 2 CH_ghi_172 6 8 0.00000000328485
Gossypium hirsutum A08 2 CH_ghi_407 4 4 0.0000103008
Gossypium hirsutum D09 2 CH_ghi_408 4 4 0.0000103008
Gossypium hirsutum D08 2 CH_ghi_409 4 4 0.0000103008
Glycine max Gm10 2 CH_gma_257 4 4 0.00000577599
Glycine max Gm03 2 CH_gma_587 4 9 0.000718473
Glycine max Gm13 2 CH_gma_61 7 9 0.0000000000065842
Gossypium raimondii Chr04 2 CH_gra_199 4 4 0.00000630272
Gossypium raimondii Chr06 2 CH_gra_200 4 4 0.00000630272
Gossypium raimondii Chr01 2 CH_gra_92 6 8 0.00000000217988
Helianthus annuus HanXRQChr04 2 CH_han_168 9 65 0.00000000142809
Helianthus annuus HanXRQChr14 2 CH_han_296 4 4 0.00000119686
Helianthus annuus HanXRQChr09 2 CH_han_655 4 11 0.000390191
Hydrangea macrophylla Hma1.2p1_0200F.1 2 CH_hma_104 3 3 0.0000832084
Hydrangea macrophylla Hma1.2p1_0267F.1 2 CH_hma_105 3 3 0.0000832084
Lupinus albus Lalb_Chr02 2 CH_lal_118 4 4 0.00000191754
Lotus japonicus chr3 2 CH_lja_286 4 8 0.000120385
Lotus japonicus chr5 2 CH_lja_48 6 6 0.0000000000126458
Lonicera japonica GWHAAZE00000002 2 CH_lonja_243 4 4 0.000000872073
Lonicera japonica GWHAAZE00000008 2 CH_lonja_566 3 3 0.000393541
Lonicera japonica GWHAAZE00000002 2 CH_lonja_567 3 3 0.000393541
Lactuca sativa Lsat_1_v8_lg_4 2 CH_lsa_263 4 5 0.00000474217
Lactuca sativa Lsat_1_v8_lg_6 2 CH_lsa_316 4 7 0.0000330789
Magnolia biondii Chr18 2 CH_mbi_649 4 29 0.000811418
Malus domestica Chr01 2 CH_mdo_662 3 3 0.000404363
Malus domestica Chr05 2 CH_mdo_663 3 3 0.000404363
Manihot esculenta Chromosome06 2 CH_mes_475 3 3 0.000850707
Manihot esculenta Chromosome05 2 CH_mes_476 3 3 0.000850707
Manihot esculenta Chromosome03 2 CH_mes_477 3 3 0.000850707
Manihot esculenta Chromosome15 2 CH_mes_478 3 3 0.000850707
Manihot esculenta Chromosome13 2 CH_mes_479 3 3 0.000850707
Nelumbo nucifera chr3 2 CH_nnu_297 3 3 0.000079049
Nelumbo nucifera chr1 2 CH_nnu_47 5 5 0.000000000103554
Nicotiana tabacum Nitab4.5_0000876 2 CH_nta_154 3 3 0.000399151
Nicotiana tabacum Nitab4.5_0000436 2 CH_nta_155 3 3 0.000399151
Nicotiana tabacum Nitab4.5_0002211 2 CH_nta_53 4 4 0.00000107316
Nicotiana tabacum Nitab4.5_0001088 2 CH_nta_54 4 4 0.00000107316
Olea europaea chr19 2 CH_oeu_340 3 3 0.000407251
Olea europaea chr16 2 CH_oeu_341 3 3 0.000407251
Petunia axillaris Peaxi162Scf00271 2 CH_pax_120 4 4 0.00000095804
Petunia axillaris Peaxi162Scf00078 2 CH_pax_149 4 6 0.0000143163
Petunia axillaris Peaxi162Scf00024 2 CH_pax_287 3 3 0.000406452
Petunia axillaris Peaxi162Scf00167 2 CH_pax_288 3 3 0.000406452
Punica granatum NC_045130.1 2 CH_pgr_301 3 3 0.000423272
Prunus persica Pp02 2 CH_ppe_126 5 5 0.000000000972614
Prunus persica Pp02 2 CH_ppe_425 3 3 0.000244239
Prunus persica Pp01 2 CH_ppe_426 3 3 0.000244239
Prunus persica Pp08 2 CH_ppe_427 3 3 0.000244239
Pisum sativum chr3LG5 2 CH_psa_149 4 5 0.00000153256
Populus trichocarpa Chr02 2 CH_ptr_234 4 4 0.0000020928
Populus trichocarpa Chr14 2 CH_ptr_263 4 5 0.0000104409
Populus trichocarpa Chr01 2 CH_ptr_522 3 3 0.000762218
Populus trichocarpa Chr03 2 CH_ptr_523 3 3 0.000762218
Populus trichocarpa Chr05 2 CH_ptr_524 3 3 0.000762218
Populus trichocarpa Chr08 2 CH_ptr_525 3 3 0.000762218
Phaseolus vulgaris Chr07 2 CH_pvu_146 5 7 0.000000178918
Phaseolus vulgaris Chr01 2 CH_pvu_228 4 5 0.00001384
Phaseolus vulgaris Chr07 2 CH_pvu_481 3 3 0.000888604
Quercus lobata 10 2 CH_qlo_1000 3 4 0.000730959
Quercus lobata 9 2 CH_qlo_1001 3 4 0.000730959
Quercus lobata 4 2 CH_qlo_513 4 5 0.00000148594
Quercus lobata 6 2 CH_qlo_603 4 8 0.0000207218
Quercus lobata 6 2 CH_qlo_838 3 3 0.000182968
Quercus lobata 9 2 CH_qlo_839 3 3 0.000182968
Rosa chinensis RcHm_v2.0_Chr2 2 CH_rch_166 6 13 0.000000000602639
Rosa chinensis RcHm_v2.0_Chr1 2 CH_rch_180 5 6 0.00000000158861
Rosa chinensis RcHm_v2.0_Chr1 2 CH_rch_623 3 3 0.000142176
Rosa chinensis RcHm_v2.0_Chr6 2 CH_rch_95 6 6 0.000000000000354023
Rhododendron simsii chr07 2 CH_rsi_138 6 12 0.00000000463166
Rhododendron simsii chr01 2 CH_rsi_261 4 5 0.00000489056
Rhododendron simsii chr03 2 CH_rsi_509 3 3 0.000421796
Striga asiatica scaffold60 2 CH_sas_138 3 4 0.000614863
Salvia bowleyana GWHASIU00000008 2 CH_sbo_102 5 6 0.00000000233125
Salvia bowleyana GWHASIU00000007 2 CH_sbo_355 3 3 0.000169977
Salvia bowleyana GWHASIU00000003 2 CH_sbo_445 3 4 0.000679115
Salix brachista GWHAAZH00000002 2 CH_sbr_148 4 4 0.0000020064
Salix brachista GWHAAZH00000003 2 CH_sbr_400 3 3 0.000723604
Salix brachista GWHAAZH00000005 2 CH_sbr_401 3 3 0.000723604
Salix brachista GWHAAZH00000008 2 CH_sbr_402 3 3 0.000723604
Salix brachista GWHAAZH00000001 2 CH_sbr_403 3 3 0.000723604
Salix brachista GWHAAZH00000003 2 CH_sbr_64 7 14 0.000000000134785
Sequoiadendron giganteum chr4 2 CH_sgi_1337 3 5 0.000504341
Sequoiadendron giganteum chr4 2 CH_sgi_191 7 13 0.0000000000000815823
Sequoiadendron giganteum chr9 2 CH_sgi_671 4 10 0.0000107991
Sequoiadendron giganteum chr4 2 CH_sgi_973 3 3 0.000050514
Solanum lycopersicum SL4.0ch03 2 CH_sly_198 4 4 0.0000011148
Solanum lycopersicum SL4.0ch09 2 CH_sly_497 3 3 0.000474808
Solanum lycopersicum SL4.0ch09 2 CH_sly_498 3 3 0.000474808
Solanum lycopersicum SL4.0ch08 2 CH_sly_499 3 3 0.000474808
Solanum lycopersicum SL4.0ch05 2 CH_sly_500 3 3 0.000474808
Solanum lycopersicum SL4.0ch03 2 CH_sly_501 3 3 0.000474808
Schrenkiella parvula ch1-1 2 CH_spa_242 3 3 0.000369269
Schrenkiella parvula ch3-1 2 CH_spa_243 3 3 0.000369269
Solanum pennellii Spenn-ch03 2 CH_spe_153 5 9 0.000000113525
Solanum pennellii Spenn-ch11 2 CH_spe_450 3 3 0.000282769
Solanum pennellii Spenn-ch05 2 CH_spe_451 3 3 0.000282769
Solanum pennellii Spenn-ch03 2 CH_spe_452 3 3 0.000282769
Solanum pennellii Spenn-ch08 2 CH_spe_453 3 3 0.000282769
Solanum tuberosum ST4.03ch01 2 CH_stu_235 4 4 0.00000112815
Solanum tuberosum ST4.03ch03 2 CH_stu_288 4 5 0.00000563042
Solanum tuberosum ST4.03ch03 2 CH_stu_550 3 3 0.000494687
Solanum tuberosum ST4.03ch11 2 CH_stu_551 3 3 0.000494687
Solanum tuberosum ST4.03ch05 2 CH_stu_552 3 3 0.000494687
Solanum tuberosum ST4.03ch08 2 CH_stu_553 3 3 0.000494687
Solanum tuberosum ST4.03ch01 2 CH_stu_620 4 13 0.000793443
Trochodendron aralioides group17 2 CH_tar_539 3 3 0.000748376
Trochodendron aralioides group2 2 CH_tar_540 3 3 0.000748376
Trochodendron aralioides group0 2 CH_tar_57 6 8 0.000000000425215
Trochodendron aralioides group12 2 CH_tar_82 5 5 0.0000000056466
Trochodendron aralioides group15 2 CH_tar_83 5 5 0.0000000056466
Theobroma cacao Chromosome_1 2 CH_tca_184 4 4 0.000000615091
Theobroma cacao Chromosome_1 2 CH_tca_220 4 5 0.0000030702
Theobroma cacao Chromosome_4 2 CH_tca_369 3 3 0.00028958
Tarenaya hassleriana NW_010964923.1 2 CH_tha_193 3 3 0.000624386
Trifolium pratense Tp57577_TGAC_v2_LG1 2 CH_tpr_187 4 7 0.0000192283
Tripterygium wilfordii NC_052241.1 2 CH_twi_124 4 4 0.00000289226
Tripterygium wilfordii NC_052245.1 2 CH_twi_325 3 3 0.000978783
Tripterygium wilfordii NC_052232.1 2 CH_twi_326 3 3 0.000978783
Tripterygium wilfordii NC_052243.1 2 CH_twi_77 5 5 0.00000000846608
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_134 4 4 0.00000060163
Vaccinium macrocarpon chr8_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_298 3 3 0.000269743
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_299 3 3 0.000269743
Vaccinium macrocarpon chr9_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_300 3 3 0.000269743
Vigna mungo CM024071.1 2 CH_vmu_106 5 8 0.000000284907
Vigna mungo CM024071.1 2 CH_vmu_407 3 3 0.000687241
Vigna mungo CM024071.1 2 CH_vmu_408 3 3 0.000687241
Vigna mungo CM024070.1 2 CH_vmu_56 5 5 0.00000000512238
Vitis vinifera chr7 2 CH_vvi_171 4 4 0.000000304078
Vitis vinifera chr16 2 CH_vvi_20 12 23 1.86844e-23
Vitis vinifera chr15 2 CH_vvi_304 3 3 0.000170102

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001