Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.transcriptional regulation.transcriptional repression.LEUNIG-SEUSS repressor complex.component LUG/LUH

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_362 1 CH_aag_94 2 2 0.0000802568
Amborella trichopoda AmTr_v1.0_scaffold00037 1 CH_atr_327 2 2 0.000794407
Camellia sinensis var. sinensis Chr11 1 CH_camsi_160 4 12 0.000000000715707
Coffea canephora chr11 1 CH_ccan_89 3 20 0.000000304697
Ceratophyllum demersum 1 1 CH_cde_220 2 2 0.000473878
Davidia involucrata GWHABJS00000003 1 CH_din_417 2 2 0.000300075
Erigeron canadensis Conyza_canadensis_scaffold:9 1 CH_eca_176 3 4 0.000000676485
Magnolia biondii Chr01 1 CH_mbi_180 3 4 0.000000283024
Marchantia polymorpha scaffold_33 1 CH_mpo_71 2 2 0.000110442
Medicago truncatula chr4 1 CH_mtr_38 7 9 4.68048e-20
Olea europaea chr12 1 CH_oeu_400 2 2 0.000800683
Oryza sativa ssp. japonica chr04 1 CH_osa_383 2 2 0.000792184
Rosa chinensis RcHm_v2.0_Chr4 1 CH_rch_800 2 2 0.00083717
Sapria himalayana scaffold28_7511268 1 CH_shi_176 2 2 0.000171541
Trifolium pratense Tp57577_TGAC_v2_scaf_271 1 CH_tpr_9 6 9 9.86349e-16
Vanilla planifolia CM028161.1 1 CH_vpl_220 3 15 0.000130186
Vitis vinifera chr4 1 CH_vvi_195 3 4 0.00000121483
Anthoceros agrestis Sc2ySwM_362 2 CH_aag_94 2 2 0.0000802568
Amborella trichopoda AmTr_v1.0_scaffold00037 2 CH_atr_327 2 2 0.000794407
Camellia sinensis var. sinensis Chr11 2 CH_camsi_160 4 12 0.000000000715707
Coffea canephora chr11 2 CH_ccan_89 3 20 0.000000304697
Ceratophyllum demersum 1 2 CH_cde_220 2 2 0.000473878
Davidia involucrata GWHABJS00000003 2 CH_din_417 2 2 0.000300075
Erigeron canadensis Conyza_canadensis_scaffold:9 2 CH_eca_176 3 4 0.000000676485
Magnolia biondii Chr01 2 CH_mbi_180 3 4 0.000000283024
Marchantia polymorpha scaffold_33 2 CH_mpo_71 2 2 0.000110442
Olea europaea chr12 2 CH_oeu_400 2 2 0.000800683
Oryza sativa ssp. japonica chr04 2 CH_osa_383 2 2 0.000792184
Rosa chinensis RcHm_v2.0_Chr4 2 CH_rch_800 2 2 0.00083717
Sapria himalayana scaffold28_7511268 2 CH_shi_176 2 2 0.000171541
Trifolium pratense Tp57577_TGAC_v2_scaf_271 2 CH_tpr_9 6 9 9.86349e-16
Vanilla planifolia CM028161.1 2 CH_vpl_220 3 15 0.000130186
Vitis vinifera chr4 2 CH_vvi_195 3 4 0.00000121483

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001