Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.transcriptional regulation.transcriptional repression.transcriptional repressor (TIE/SPL)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_9 1 CH_amhyb_149 2 2 0.0000841751
Brassica carinata ChrC01 1 CH_bca_91 4 4 0.00000000017539
Pisum sativum chr1LG6 1 CH_psa_136 3 4 0.000000571371
Solanum pennellii Spenn-ch10 1 CH_spe_567 2 2 0.00093406
Solanum tuberosum ST4.03ch10 1 CH_stu_221 3 4 0.000000551434
Amaranthus hybridus AmaHy_arrow1_Scaffold_9 2 CH_amhyb_149 2 2 0.0000841751
Brassica carinata ChrC01 2 CH_bca_91 4 4 0.00000000017539
Pisum sativum chr1LG6 2 CH_psa_136 3 4 0.000000571371
Solanum pennellii Spenn-ch10 2 CH_spe_567 2 2 0.00093406
Solanum tuberosum ST4.03ch10 2 CH_stu_221 3 4 0.000000551434

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001