Functional clusters
Information
- Type MapMan
- Description RNA biosynthesis.transcriptional regulation.NF-Y transcription factor complex.component NF-YB
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis lyrata | scaffold_1 | 1 | CH_aly_436 | 3 | 17 | 0.000974154 |
| Cucumis sativus L. | chr3 | 1 | CH_csa_65 | 4 | 4 | 0.000000000863903 |
| Davidia involucrata | GWHABJS00000001 | 1 | CH_din_395 | 3 | 8 | 0.00027894 |
| Erythranthe guttata | scaffold_14 | 1 | CH_egut_334 | 3 | 3 | 0.000175767 |
| Erythranthe guttata | scaffold_5 | 1 | CH_egut_386 | 4 | 13 | 0.000221334 |
| Erythranthe guttata | scaffold_5 | 1 | CH_egut_56 | 9 | 45 | 0.00000000000348163 |
| Erythranthe guttata | scaffold_2 | 1 | CH_egut_88 | 6 | 11 | 0.000000000430154 |
| Lonicera japonica | GWHAAZE00000005 | 1 | CH_lonja_13 | 10 | 13 | 3.93863e-26 |
| Solanum lycopersicum | SL4.0ch07 | 1 | CH_sly_108 | 5 | 10 | 0.000000000951199 |
| Solanum lycopersicum | SL4.0ch05 | 1 | CH_sly_119 | 5 | 12 | 0.00000000298653 |
| Solanum pennellii | Spenn-ch05 | 1 | CH_spe_13 | 8 | 11 | 1.31586e-20 |
| Solanum tuberosum | ST4.03ch05 | 1 | CH_stu_109 | 5 | 14 | 0.000000000884914 |
| Arabidopsis lyrata | scaffold_1 | 2 | CH_aly_436 | 3 | 17 | 0.000974154 |
| Cucumis sativus L. | chr3 | 2 | CH_csa_65 | 4 | 4 | 0.000000000863903 |
| Davidia involucrata | GWHABJS00000001 | 2 | CH_din_395 | 3 | 8 | 0.00027894 |
| Eucalyptus grandis | Chr02 | 2 | CH_egr_411 | 4 | 8 | 0.000000042103 |
| Erythranthe guttata | scaffold_14 | 2 | CH_egut_334 | 3 | 3 | 0.000175767 |
| Erythranthe guttata | scaffold_5 | 2 | CH_egut_386 | 4 | 13 | 0.000221334 |
| Erythranthe guttata | scaffold_5 | 2 | CH_egut_56 | 9 | 45 | 0.00000000000348163 |
| Erythranthe guttata | scaffold_2 | 2 | CH_egut_88 | 6 | 11 | 0.000000000430154 |
| Lonicera japonica | GWHAAZE00000005 | 2 | CH_lonja_13 | 10 | 13 | 3.93863e-26 |
| Solanum lycopersicum | SL4.0ch07 | 2 | CH_sly_108 | 5 | 10 | 0.000000000951199 |
| Solanum lycopersicum | SL4.0ch05 | 2 | CH_sly_119 | 5 | 12 | 0.00000000298653 |
| Solanum pennellii | Spenn-ch05 | 2 | CH_spe_13 | 8 | 11 | 1.31586e-20 |
| Solanum tuberosum | ST4.03ch05 | 2 | CH_stu_109 | 5 | 14 | 0.000000000884914 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |