Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-11 1 CH_aar_252 3 3 0.000654172
Aethionema arabicum LG-11 1 CH_aar_47 6 9 0.00000000142191
Aethionema arabicum LG-5 1 CH_aar_92 4 4 0.00000196968
Acer truncatum chr1 1 CH_acertr_206 4 5 0.0000087252
Acer truncatum chr1 1 CH_acertr_533 3 3 0.000636061
Aquilegia oxysepala CHR07 1 CH_aox_258 3 3 0.000330161
Aquilegia oxysepala CHR02 1 CH_aox_57 5 7 0.00000003546
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.20 1 CH_arhy_614 3 3 0.000448214
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.10 1 CH_arhy_615 3 3 0.000448214
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.01 1 CH_arhy_616 3 3 0.000448214
Arabidopsis thaliana Chr5 1 CH_ath_154 4 5 0.000000350454
Arabidopsis thaliana Chr5 1 CH_ath_287 6 72 0.000106644
Amborella trichopoda AmTr_v1.0_scaffold00159 1 CH_atr_149 3 3 0.0000566483
Brassica carinata ChrB07 1 CH_bca_252 5 6 0.000000146859
Brassica carinata ChrC06 1 CH_bca_331 5 7 0.00000051271
Brassica carinata ChrC02 1 CH_bca_574 4 5 0.0000404626
Brassica carinata ChrC04 1 CH_bca_678 4 6 0.000121093
Brassica carinata ChrB06 1 CH_bca_971 4 8 0.000562356
Brassica oleracea C6 1 CH_bol_117 7 32 0.000000268788
Brassica oleracea C9 1 CH_bol_166 7 46 0.00000413193
Brassica oleracea C2 1 CH_bol_449 6 57 0.000986947
Brassica rapa A02 1 CH_bra_220 4 6 0.000121753
Brassica rapa A02 1 CH_bra_297 6 40 0.000360782
Camellia sinensis var. sinensis Chr15 1 CH_camsi_127 6 7 0.0000000000609902
Camellia sinensis var. sinensis Chr13 1 CH_camsi_345 7 45 0.000000857155
Camellia sinensis var. sinensis Chr2 1 CH_camsi_45 11 36 3.15694e-16
Camellia sinensis var. sinensis Chr3 1 CH_camsi_488 5 17 0.0000223346
Camellia sinensis var. sinensis Chr6 1 CH_camsi_566 4 7 0.0000539443
Cannabis sativa NC_044370.1 1 CH_cansat_201 4 8 0.0000452704
Capsicum annuum PGAv.1.6.scaffold1038 1 CH_can_117 5 5 0.0000000447794
Capsicum annuum PGAv.1.6.scaffold730 1 CH_can_13 14 27 3.57651e-22
Capsicum annuum PGAv.1.6.scaffold1058 1 CH_can_169 5 7 0.000000933439
Capsicum annuum PGAv.1.6.scaffold134 1 CH_can_307 4 6 0.000150874
Capsicum annuum PGAv.1.6.scaffold504 1 CH_can_33 9 13 0.000000000000010952
Capsicum annuum PGAv.1.6.scaffold866 1 CH_can_370 4 7 0.00035078
Cicer arietinum L. Ca_LG5_v3 1 CH_car_24 5 7 0.0000000109906
Cicer arietinum L. Ca_LG4_v3 1 CH_car_3 6 6 0.000000000000898908
Coffea canephora chr2 1 CH_ccan_114 3 4 0.00000285491
Citrus clementina scaffold_8 1 CH_ccl_473 3 3 0.000767916
Citrus clementina scaffold_9 1 CH_ccl_5 22 31 2.36335e-45
Ceratophyllum demersum 3 1 CH_cde_72 3 3 0.0000559925
Carpinus fangiana Cfa02 1 CH_cfa_197 5 28 0.0000408803
Cardamine hirsuta Chr7 1 CH_chi_191 4 5 0.0000201719
Cardamine hirsuta Chr4 1 CH_chi_384 5 23 0.000433925
Carya illinoinensis Chr04 1 CH_cil_158 6 10 0.00000000139201
Carya illinoinensis Chr14 1 CH_cil_257 4 4 0.00000118867
Carya illinoinensis Chr04 1 CH_cil_384 4 9 0.000148325
Carica papaya supercontig_173 1 CH_cpa_112 5 13 0.00000934622
Carica papaya supercontig_117 1 CH_cpa_67 5 7 0.000000154924
Carica papaya supercontig_106 1 CH_cpa_98 4 4 0.00000236363
Chenopodium quinoa C_Quinoa_Scaffold_2587 1 CH_cqu_263 4 5 0.00000624578
Chenopodium quinoa C_Quinoa_Scaffold_2187 1 CH_cqu_286 4 6 0.0000187028
Chenopodium quinoa C_Quinoa_Scaffold_2314 1 CH_cqu_513 3 3 0.000544554
Chenopodium quinoa C_Quinoa_Scaffold_4480 1 CH_cqu_65 6 7 0.0000000000447622
Capsella rubella scaffold_2 1 CH_cru_15 9 9 1.90827e-17
Capsella rubella scaffold_4 1 CH_cru_429 6 40 0.0007813
Capsella rubella scaffold_6 1 CH_cru_68 6 6 0.000000000231637
Capsella rubella scaffold_1 1 CH_cru_90 7 15 0.00000000634185
Daucus carota DCARv2_Chr2 1 CH_dca_38 5 5 0.00000000000816412
Durio zibethinus NW_019167915.1 1 CH_dzi_390 3 3 0.000838243
Durio zibethinus NW_019167938.1 1 CH_dzi_391 3 3 0.000838243
Erigeron canadensis Conyza_canadensis_scaffold:6 1 CH_eca_318 3 3 0.000131929
Erigeron canadensis Conyza_canadensis_scaffold:8 1 CH_eca_319 3 3 0.000131929
Erigeron canadensis Conyza_canadensis_scaffold:7 1 CH_eca_320 3 3 0.000131929
Eucalyptus grandis Chr11 1 CH_egr_21 15 18 3.33682e-32
Erythranthe guttata scaffold_2 1 CH_egut_215 4 4 0.00000338196
Erythranthe guttata scaffold_11 1 CH_egut_26 13 45 5.87511e-18
Erythranthe guttata scaffold_4 1 CH_egut_46 7 7 0.000000000000111254
Eutrema salsugineum scaffold_4 1 CH_esa_145 4 5 0.0000489406
Eutrema salsugineum scaffold_9 1 CH_esa_75 10 75 0.000000035408
Gossypium hirsutum D04 1 CH_ghi_183 6 9 0.00000000503197
Gossypium hirsutum D13 1 CH_ghi_198 5 5 0.0000000200077
Gossypium hirsutum D06 1 CH_ghi_75 8 11 0.0000000000000887885
Glycine max Gm20 1 CH_gma_149 5 6 0.0000000464293
Glycine max Gm10 1 CH_gma_60 7 10 0.00000000000647873
Glycine max Gm18 1 CH_gma_81 6 7 0.000000000143922
Gossypium raimondii Chr13 1 CH_gra_131 5 6 0.000000123762
Gossypium raimondii Chr12 1 CH_gra_162 5 7 0.000000431906
Gossypium raimondii Chr10 1 CH_gra_5 11 12 3.76394e-22
Helianthus annuus HanXRQChr15 1 CH_han_182 5 6 0.00000000466041
Hydrangea macrophylla Hma1.2p1_1051F.1 1 CH_hma_317 3 4 0.000332427
Hydrangea macrophylla Hma1.2p1_0661F.1 1 CH_hma_55 4 4 0.000000129421
Hydrangea macrophylla Hma1.2p1_0010F.1 1 CH_hma_92 4 10 0.0000269743
Lupinus albus Lalb_Chr02 1 CH_lal_137 4 4 0.00000573918
Lupinus albus Lalb_Chr18 1 CH_lal_143 8 72 0.00000756645
Lupinus albus Lalb_Chr20 1 CH_lal_2 15 15 2.95969e-33
Lupinus albus Lalb_Chr18 1 CH_lal_26 9 17 0.0000000000000605633
Lupinus albus Lalb_Chr15 1 CH_lal_47 6 6 0.000000000067315
Lotus japonicus chr6 1 CH_lja_106 5 6 0.0000000577216
Lotus japonicus chr4 1 CH_lja_7 13 15 6.35192e-27
Lonicera japonica GWHAAZE00000001 1 CH_lonja_161 4 4 0.00000000963403
Lonicera japonica GWHAAZE00000009 1 CH_lonja_306 3 3 0.0000139878
Lactuca sativa Lsat_1_v8_lg_1 1 CH_lsa_311 4 7 0.0000301273
Lactuca sativa Lsat_1_v8_lg_4 1 CH_lsa_353 4 8 0.0000601515
Magnolia biondii Chr10 1 CH_mbi_152 6 33 0.0000000706207
Magnolia biondii Chr16 1 CH_mbi_382 4 16 0.000110421
Malus domestica Chr01 1 CH_mdo_327 5 15 0.00000733944
Malus domestica Chr06 1 CH_mdo_355 4 6 0.0000175112
Malus domestica Chr12 1 CH_mdo_674 3 3 0.000546729
Manihot esculenta Chromosome05 1 CH_mes_473 3 3 0.000613778
Manihot esculenta Chromosome15 1 CH_mes_474 3 3 0.000613778
Medicago truncatula chr3 1 CH_mtr_300 5 7 0.000000193135
Medicago truncatula chr1 1 CH_mtr_397 4 4 0.00000328299
Nelumbo nucifera chr2 1 CH_nnu_49 5 5 0.000000000135721
Nelumbo nucifera chr1 1 CH_nnu_80 5 9 0.0000000170324
Nicotiana tabacum Nitab4.5_0000047 1 CH_nta_44 5 9 0.000000472266
Olea europaea chr22 1 CH_oeu_282 3 3 0.00026583
Olea europaea chr15 1 CH_oeu_66 6 21 0.0000000880091
Olea europaea chr8 1 CH_oeu_80 4 4 0.000000496667
Petunia axillaris Peaxi162Scf00016 1 CH_pax_143 4 4 0.00000499474
Petunia axillaris Peaxi162Scf00104 1 CH_pax_146 5 11 0.00000805469
Petunia axillaris Peaxi162Scf00611 1 CH_pax_40 6 7 0.000000000435776
Punica granatum NC_045133.1 1 CH_pgr_147 7 40 0.00000283401
Punica granatum NC_045128.1 1 CH_pgr_58 9 33 0.0000000000900121
Prunus persica Pp01 1 CH_ppe_105 6 7 0.000000000127123
Prunus persica Pp06 1 CH_ppe_379 6 48 0.000201395
Prunus persica Pp07 1 CH_ppe_496 3 3 0.000739229
Pisum sativum chr6LG2 1 CH_psa_18 12 68 0.0000000000000032668
Pisum sativum chr7LG7 1 CH_psa_368 3 3 0.000479512
Pisum sativum chr5LG3 1 CH_psa_50 6 9 0.000000000452006
Pisum sativum chr4LG4 1 CH_psa_57 7 21 0.00000000134226
Pisum sativum chr6LG2 1 CH_psa_62 5 5 0.00000000244088
Papaver somniferum NW_020647637.1 1 CH_pso_110 6 7 0.0000000000208406
Papaver somniferum NC_039363.1 1 CH_pso_174 6 14 0.00000000884612
Papaver somniferum NC_039368.1 1 CH_pso_194 6 16 0.0000000235181
Papaver somniferum NC_039360.1 1 CH_pso_213 8 67 0.0000000544224
Papaver somniferum NC_039358.1 1 CH_pso_343 4 5 0.00000473178
Papaver somniferum NW_020653081.1 1 CH_pso_395 6 46 0.0000262845
Papaver somniferum NW_020641039.1 1 CH_pso_641 3 3 0.00052926
Populus trichocarpa Chr03 1 CH_ptr_134 5 5 0.00000000485103
Populus trichocarpa Chr07 1 CH_ptr_518 3 3 0.000693657
Phaseolus vulgaris Chr04 1 CH_pvu_22 10 13 2.36163e-19
Phaseolus vulgaris Chr07 1 CH_pvu_447 3 3 0.000690892
Phaseolus vulgaris Chr06 1 CH_pvu_81 6 8 0.000000000435825
Quercus lobata 11 1 CH_qlo_34 12 17 1.53573e-25
Quercus lobata 11 1 CH_qlo_724 4 10 0.0000884403
Quercus lobata 5 1 CH_qlo_845 3 3 0.000238466
Rosa chinensis RcHm_v2.0_Chr1 1 CH_rch_537 4 11 0.000108744
Rhododendron simsii chr11 1 CH_rsi_254 4 5 0.00000413983
Simmondsia chinensis GWHAASQ00000018 1 CH_sci_106 4 6 0.00000875434
Simmondsia chinensis GWHAASQ00000008 1 CH_sci_98 4 5 0.00000292322
Sechium edule LG09 1 CH_sed_75 5 7 0.0000000491967
Sequoiadendron giganteum chr1 1 CH_sgi_100 9 13 2.03699e-19
Sequoiadendron giganteum chr11 1 CH_sgi_1408 3 5 0.000932103
Sequoiadendron giganteum chr2 1 CH_sgi_149 8 14 7.45609e-16
Sequoiadendron giganteum HRSCAF_1 1 CH_sgi_328 6 13 0.000000000304918
Sequoiadendron giganteum chr2 1 CH_sgi_991 3 3 0.0000933922
Sequoiadendron giganteum chr2 1 CH_sgi_992 3 3 0.0000933922
Solanum lycopersicum SL4.0ch01 1 CH_sly_225 4 4 0.00000337497
Solanum lycopersicum SL4.0ch12 1 CH_sly_226 4 4 0.00000337497
Solanum lycopersicum SL4.0ch04 1 CH_sly_260 5 14 0.000020345
Solanum lycopersicum SL4.0ch03 1 CH_sly_373 4 7 0.000117242
Solanum pennellii Spenn-ch01 1 CH_spe_249 4 6 0.0000282412
Solanum pennellii Spenn-ch12 1 CH_spe_458 4 10 0.000392201
Solanum pennellii Spenn-ch01 1 CH_spe_521 3 3 0.000752179
Solanum tuberosum ST4.03ch01 1 CH_stu_44 9 12 0.00000000000000165012
Solanum tuberosum ST4.03ch12 1 CH_stu_535 4 7 0.000323808
Solanum tuberosum ST4.03ch04 1 CH_stu_98 10 50 0.000000000254139
Trochodendron aralioides group5 1 CH_tar_164 4 4 0.000000878608
Trochodendron aralioides group17 1 CH_tar_69 7 24 0.00000000297454
Theobroma cacao Chromosome_5 1 CH_tca_201 4 4 0.000000849485
Theobroma cacao Chromosome_2 1 CH_tca_375 3 3 0.000368191
Tarenaya hassleriana NW_010966274.1 1 CH_tha_89 4 5 0.0000191913
Trifolium pratense Tp57577_TGAC_v2_LG3 1 CH_tpr_183 4 5 0.0000125244
Tripterygium wilfordii NC_052249.1 1 CH_twi_295 3 3 0.000585496
Tripterygium wilfordii NC_052246.1 1 CH_twi_39 6 6 0.00000000000864342
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_121 4 4 0.00000022002
Vaccinium macrocarpon chr11_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_354 3 4 0.000511213
Vigna mungo CM024075.1 1 CH_vmu_34 6 8 0.0000000000434947
Vigna mungo CM024069.1 1 CH_vmu_414 3 4 0.000946032
Vigna mungo CM024071.1 1 CH_vmu_415 3 4 0.000946032
Vitis vinifera chr3 1 CH_vvi_142 5 8 0.0000000442587
Zea mays 9 1 CH_zma_144 4 8 0.0000487865
Aethionema arabicum LG-11 2 CH_aar_252 3 3 0.000654172
Aethionema arabicum LG-11 2 CH_aar_47 6 9 0.00000000142191
Aethionema arabicum LG-5 2 CH_aar_92 4 4 0.00000196968
Acer truncatum chr1 2 CH_acertr_206 4 5 0.0000087252
Acer truncatum chr1 2 CH_acertr_533 3 3 0.000636061
Aquilegia oxysepala CHR07 2 CH_aox_258 3 3 0.000330161
Aquilegia oxysepala CHR02 2 CH_aox_57 5 7 0.00000003546
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.20 2 CH_arhy_614 3 3 0.000448214
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.10 2 CH_arhy_615 3 3 0.000448214
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.01 2 CH_arhy_616 3 3 0.000448214
Arabidopsis thaliana Chr5 2 CH_ath_154 4 5 0.000000350454
Arabidopsis thaliana Chr5 2 CH_ath_287 6 72 0.000106644
Amborella trichopoda AmTr_v1.0_scaffold00159 2 CH_atr_149 3 3 0.0000566483
Brassica carinata ChrB07 2 CH_bca_252 5 6 0.000000146859
Brassica carinata ChrC06 2 CH_bca_331 5 7 0.00000051271
Brassica carinata ChrC02 2 CH_bca_574 4 5 0.0000404626
Brassica carinata ChrC04 2 CH_bca_678 4 6 0.000121093
Brassica carinata ChrB06 2 CH_bca_971 4 8 0.000562356
Brassica oleracea C6 2 CH_bol_117 7 32 0.000000268788
Brassica oleracea C9 2 CH_bol_166 7 46 0.00000413193
Brassica oleracea C2 2 CH_bol_449 6 57 0.000986947
Brassica rapa A02 2 CH_bra_220 4 6 0.000121753
Brassica rapa A02 2 CH_bra_297 6 40 0.000360782
Camellia sinensis var. sinensis Chr15 2 CH_camsi_127 6 7 0.0000000000609902
Camellia sinensis var. sinensis Chr13 2 CH_camsi_345 7 45 0.000000857155
Camellia sinensis var. sinensis Chr2 2 CH_camsi_45 11 36 3.15694e-16
Camellia sinensis var. sinensis Chr3 2 CH_camsi_488 5 17 0.0000223346
Camellia sinensis var. sinensis Chr6 2 CH_camsi_566 4 7 0.0000539443
Cannabis sativa NC_044370.1 2 CH_cansat_201 4 8 0.0000452704
Capsicum annuum PGAv.1.6.scaffold1038 2 CH_can_117 5 5 0.0000000447794
Capsicum annuum PGAv.1.6.scaffold730 2 CH_can_13 14 27 3.57651e-22
Capsicum annuum PGAv.1.6.scaffold1058 2 CH_can_169 5 7 0.000000933439
Capsicum annuum PGAv.1.6.scaffold134 2 CH_can_307 4 6 0.000150874
Capsicum annuum PGAv.1.6.scaffold504 2 CH_can_33 9 13 0.000000000000010952
Capsicum annuum PGAv.1.6.scaffold866 2 CH_can_370 4 7 0.00035078
Cicer arietinum L. Ca_LG5_v3 2 CH_car_24 5 7 0.0000000109906
Cicer arietinum L. Ca_LG4_v3 2 CH_car_3 6 6 0.000000000000898908
Coffea canephora chr2 2 CH_ccan_114 3 4 0.00000285491
Citrus clementina scaffold_8 2 CH_ccl_473 3 3 0.000767916
Citrus clementina scaffold_9 2 CH_ccl_5 22 31 2.36335e-45
Ceratophyllum demersum 3 2 CH_cde_72 3 3 0.0000559925
Carpinus fangiana Cfa02 2 CH_cfa_197 5 28 0.0000408803
Cardamine hirsuta Chr7 2 CH_chi_191 4 5 0.0000201719
Cardamine hirsuta Chr4 2 CH_chi_384 5 23 0.000433925
Carya illinoinensis Chr04 2 CH_cil_158 6 10 0.00000000139201
Carya illinoinensis Chr14 2 CH_cil_257 4 4 0.00000118867
Carya illinoinensis Chr04 2 CH_cil_384 4 9 0.000148325
Carica papaya supercontig_173 2 CH_cpa_112 5 13 0.00000934622
Carica papaya supercontig_117 2 CH_cpa_67 5 7 0.000000154924
Carica papaya supercontig_106 2 CH_cpa_98 4 4 0.00000236363
Chenopodium quinoa C_Quinoa_Scaffold_2587 2 CH_cqu_263 4 5 0.00000624578
Chenopodium quinoa C_Quinoa_Scaffold_2187 2 CH_cqu_286 4 6 0.0000187028
Chenopodium quinoa C_Quinoa_Scaffold_2314 2 CH_cqu_513 3 3 0.000544554
Chenopodium quinoa C_Quinoa_Scaffold_4480 2 CH_cqu_65 6 7 0.0000000000447622
Capsella rubella scaffold_2 2 CH_cru_15 9 9 1.90827e-17
Capsella rubella scaffold_4 2 CH_cru_429 6 40 0.0007813
Capsella rubella scaffold_6 2 CH_cru_68 6 6 0.000000000231637
Capsella rubella scaffold_1 2 CH_cru_90 7 15 0.00000000634185
Daucus carota DCARv2_Chr2 2 CH_dca_38 5 5 0.00000000000816412
Durio zibethinus NW_019167915.1 2 CH_dzi_390 3 3 0.000838243
Durio zibethinus NW_019167938.1 2 CH_dzi_391 3 3 0.000838243
Erigeron canadensis Conyza_canadensis_scaffold:6 2 CH_eca_318 3 3 0.000131929
Erigeron canadensis Conyza_canadensis_scaffold:8 2 CH_eca_319 3 3 0.000131929
Erigeron canadensis Conyza_canadensis_scaffold:7 2 CH_eca_320 3 3 0.000131929
Eucalyptus grandis Chr11 2 CH_egr_21 15 18 3.33682e-32
Eucalyptus grandis Chr05 2 CH_egr_372 8 45 0.0000000163583
Eucalyptus grandis Chr05 2 CH_egr_532 4 4 0.00000183429
Eucalyptus grandis Chr09 2 CH_egr_737 4 8 0.000127306
Eucalyptus grandis Chr04 2 CH_egr_914 3 3 0.000688764
Erythranthe guttata scaffold_2 2 CH_egut_215 4 4 0.00000338196
Erythranthe guttata scaffold_11 2 CH_egut_26 13 45 5.87511e-18
Erythranthe guttata scaffold_4 2 CH_egut_46 7 7 0.000000000000111254
Eutrema salsugineum scaffold_4 2 CH_esa_145 4 5 0.0000489406
Eutrema salsugineum scaffold_9 2 CH_esa_75 10 75 0.000000035408
Gossypium hirsutum D04 2 CH_ghi_183 6 9 0.00000000503197
Gossypium hirsutum D13 2 CH_ghi_198 5 5 0.0000000200077
Gossypium hirsutum D04 2 CH_ghi_739 4 9 0.000457621
Gossypium hirsutum D06 2 CH_ghi_75 8 11 0.0000000000000887885
Glycine max Gm20 2 CH_gma_149 5 6 0.0000000464293
Glycine max Gm10 2 CH_gma_60 7 10 0.00000000000647873
Glycine max Gm18 2 CH_gma_81 6 7 0.000000000143922
Gossypium raimondii Chr13 2 CH_gra_131 5 6 0.000000123762
Gossypium raimondii Chr12 2 CH_gra_162 5 7 0.000000431906
Gossypium raimondii Chr10 2 CH_gra_5 11 12 3.76394e-22
Helianthus annuus HanXRQChr15 2 CH_han_182 5 6 0.00000000466041
Hydrangea macrophylla Hma1.2p1_1051F.1 2 CH_hma_317 3 4 0.000332427
Hydrangea macrophylla Hma1.2p1_0661F.1 2 CH_hma_55 4 4 0.000000129421
Hydrangea macrophylla Hma1.2p1_0010F.1 2 CH_hma_92 4 10 0.0000269743
Lupinus albus Lalb_Chr02 2 CH_lal_137 4 4 0.00000573918
Lupinus albus Lalb_Chr18 2 CH_lal_143 8 72 0.00000756645
Lupinus albus Lalb_Chr20 2 CH_lal_2 15 15 2.95969e-33
Lupinus albus Lalb_Chr18 2 CH_lal_26 9 17 0.0000000000000605633
Lupinus albus Lalb_Chr15 2 CH_lal_47 6 6 0.000000000067315
Lotus japonicus chr6 2 CH_lja_106 5 6 0.0000000577216
Lotus japonicus chr4 2 CH_lja_7 13 15 6.35192e-27
Lonicera japonica GWHAAZE00000001 2 CH_lonja_161 4 4 0.00000000963403
Lonicera japonica GWHAAZE00000009 2 CH_lonja_306 3 3 0.0000139878
Lactuca sativa Lsat_1_v8_lg_1 2 CH_lsa_311 4 7 0.0000301273
Lactuca sativa Lsat_1_v8_lg_4 2 CH_lsa_353 4 8 0.0000601515
Magnolia biondii Chr10 2 CH_mbi_152 6 33 0.0000000706207
Magnolia biondii Chr16 2 CH_mbi_382 4 16 0.000110421
Malus domestica Chr01 2 CH_mdo_327 5 15 0.00000733944
Malus domestica Chr06 2 CH_mdo_355 4 6 0.0000175112
Malus domestica Chr12 2 CH_mdo_674 3 3 0.000546729
Manihot esculenta Chromosome05 2 CH_mes_473 3 3 0.000613778
Manihot esculenta Chromosome15 2 CH_mes_474 3 3 0.000613778
Nelumbo nucifera chr2 2 CH_nnu_49 5 5 0.000000000135721
Nelumbo nucifera chr1 2 CH_nnu_80 5 9 0.0000000170324
Nicotiana tabacum Nitab4.5_0000047 2 CH_nta_44 5 9 0.000000472266
Olea europaea chr22 2 CH_oeu_282 3 3 0.00026583
Olea europaea chr15 2 CH_oeu_66 6 21 0.0000000880091
Olea europaea chr8 2 CH_oeu_80 4 4 0.000000496667
Petunia axillaris Peaxi162Scf00016 2 CH_pax_143 4 4 0.00000499474
Petunia axillaris Peaxi162Scf00104 2 CH_pax_146 5 11 0.00000805469
Petunia axillaris Peaxi162Scf00611 2 CH_pax_40 6 7 0.000000000435776
Punica granatum NC_045133.1 2 CH_pgr_147 7 40 0.00000283401
Punica granatum NC_045128.1 2 CH_pgr_58 9 33 0.0000000000900121
Prunus persica Pp01 2 CH_ppe_105 6 7 0.000000000127123
Prunus persica Pp06 2 CH_ppe_379 6 48 0.000201395
Prunus persica Pp07 2 CH_ppe_496 3 3 0.000739229
Pisum sativum chr6LG2 2 CH_psa_18 12 68 0.0000000000000032668
Pisum sativum chr7LG7 2 CH_psa_368 3 3 0.000479512
Pisum sativum chr5LG3 2 CH_psa_50 6 9 0.000000000452006
Pisum sativum chr4LG4 2 CH_psa_57 7 21 0.00000000134226
Pisum sativum chr6LG2 2 CH_psa_62 5 5 0.00000000244088
Papaver somniferum NW_020647637.1 2 CH_pso_110 6 7 0.0000000000208406
Papaver somniferum NC_039363.1 2 CH_pso_174 6 14 0.00000000884612
Papaver somniferum NC_039368.1 2 CH_pso_194 6 16 0.0000000235181
Papaver somniferum NC_039360.1 2 CH_pso_213 8 67 0.0000000544224
Papaver somniferum NC_039358.1 2 CH_pso_343 4 5 0.00000473178
Papaver somniferum NW_020653081.1 2 CH_pso_395 6 46 0.0000262845
Papaver somniferum NW_020641039.1 2 CH_pso_641 3 3 0.00052926
Populus trichocarpa Chr03 2 CH_ptr_134 5 5 0.00000000485103
Populus trichocarpa Chr07 2 CH_ptr_518 3 3 0.000693657
Phaseolus vulgaris Chr04 2 CH_pvu_22 10 13 2.36163e-19
Phaseolus vulgaris Chr07 2 CH_pvu_447 3 3 0.000690892
Phaseolus vulgaris Chr06 2 CH_pvu_81 6 8 0.000000000435825
Quercus lobata 11 2 CH_qlo_34 12 17 1.53573e-25
Quercus lobata 11 2 CH_qlo_724 4 10 0.0000884403
Quercus lobata 5 2 CH_qlo_845 3 3 0.000238466
Rosa chinensis RcHm_v2.0_Chr1 2 CH_rch_537 4 11 0.000108744
Rhododendron simsii chr11 2 CH_rsi_254 4 5 0.00000413983
Simmondsia chinensis GWHAASQ00000018 2 CH_sci_106 4 6 0.00000875434
Simmondsia chinensis GWHAASQ00000008 2 CH_sci_98 4 5 0.00000292322
Sechium edule LG09 2 CH_sed_75 5 7 0.0000000491967
Sequoiadendron giganteum chr1 2 CH_sgi_100 9 13 2.03699e-19
Sequoiadendron giganteum chr11 2 CH_sgi_1408 3 5 0.000932103
Sequoiadendron giganteum chr2 2 CH_sgi_149 8 14 7.45609e-16
Sequoiadendron giganteum HRSCAF_1 2 CH_sgi_328 6 13 0.000000000304918
Sequoiadendron giganteum chr2 2 CH_sgi_991 3 3 0.0000933922
Sequoiadendron giganteum chr2 2 CH_sgi_992 3 3 0.0000933922
Solanum lycopersicum SL4.0ch01 2 CH_sly_225 4 4 0.00000337497
Solanum lycopersicum SL4.0ch12 2 CH_sly_226 4 4 0.00000337497
Solanum lycopersicum SL4.0ch04 2 CH_sly_260 5 14 0.000020345
Solanum lycopersicum SL4.0ch03 2 CH_sly_373 4 7 0.000117242
Solanum pennellii Spenn-ch01 2 CH_spe_249 4 6 0.0000282412
Solanum pennellii Spenn-ch12 2 CH_spe_458 4 10 0.000392201
Solanum pennellii Spenn-ch01 2 CH_spe_521 3 3 0.000752179
Solanum tuberosum ST4.03ch01 2 CH_stu_44 9 12 0.00000000000000165012
Solanum tuberosum ST4.03ch12 2 CH_stu_535 4 7 0.000323808
Solanum tuberosum ST4.03ch04 2 CH_stu_98 10 50 0.000000000254139
Trochodendron aralioides group5 2 CH_tar_164 4 4 0.000000878608
Trochodendron aralioides group17 2 CH_tar_69 7 24 0.00000000297454
Theobroma cacao Chromosome_5 2 CH_tca_201 4 4 0.000000849485
Theobroma cacao Chromosome_2 2 CH_tca_375 3 3 0.000368191
Tarenaya hassleriana NW_010966274.1 2 CH_tha_89 4 5 0.0000191913
Trifolium pratense Tp57577_TGAC_v2_LG3 2 CH_tpr_183 4 5 0.0000125244
Tripterygium wilfordii NC_052249.1 2 CH_twi_295 3 3 0.000585496
Tripterygium wilfordii NC_052246.1 2 CH_twi_39 6 6 0.00000000000864342
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_121 4 4 0.00000022002
Vaccinium macrocarpon chr11_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_354 3 4 0.000511213
Vigna mungo CM024075.1 2 CH_vmu_34 6 8 0.0000000000434947
Vigna mungo CM024069.1 2 CH_vmu_414 3 4 0.000946032
Vigna mungo CM024071.1 2 CH_vmu_415 3 4 0.000946032
Vitis vinifera chr3 2 CH_vvi_142 5 8 0.0000000442587
Zea mays 9 2 CH_zma_144 4 8 0.0000487865

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001