Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.RNA polymerase II-dependent transcription.transcription termination.R-loop removal.ribonuclease (RNH1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica oleracea C3 1 CH_bol_301 2 3 0.000196117
Durio zibethinus NW_019168270.1 1 CH_dzi_227 2 2 0.000139047
Erigeron canadensis Conyza_canadensis_scaffold:2 1 CH_eca_68 4 8 0.000000000284558
Papaver somniferum NC_039364.1 1 CH_pso_379 3 33 0.0000165973
Solanum lycopersicum SL4.0ch02 1 CH_sly_461 2 2 0.000352164
Solanum pennellii Spenn-ch02 1 CH_spe_475 2 2 0.00044479
Trifolium pratense Tp57577_TGAC_v2_LG2 1 CH_tpr_217 2 2 0.0000756974
Brassica oleracea C3 2 CH_bol_301 2 3 0.000196117
Durio zibethinus NW_019168270.1 2 CH_dzi_227 2 2 0.000139047
Erigeron canadensis Conyza_canadensis_scaffold:2 2 CH_eca_68 4 8 0.000000000284558
Papaver somniferum NC_039364.1 2 CH_pso_379 3 33 0.0000165973
Solanum lycopersicum SL4.0ch02 2 CH_sly_461 2 2 0.000352164
Solanum pennellii Spenn-ch02 2 CH_spe_475 2 2 0.00044479
Trifolium pratense Tp57577_TGAC_v2_LG2 2 CH_tpr_217 2 2 0.0000756974

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001