Functional clusters
Information
- Type MapMan
- Description RNA biosynthesis.RNA polymerase II-dependent transcription.transcription termination.R-loop removal.ribonuclease (RNH1)
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Brassica oleracea | C3 | 1 | CH_bol_301 | 2 | 3 | 0.000196117 |
Durio zibethinus | NW_019168270.1 | 1 | CH_dzi_227 | 2 | 2 | 0.000139047 |
Erigeron canadensis | Conyza_canadensis_scaffold:2 | 1 | CH_eca_68 | 4 | 8 | 0.000000000284558 |
Papaver somniferum | NC_039364.1 | 1 | CH_pso_379 | 3 | 33 | 0.0000165973 |
Solanum lycopersicum | SL4.0ch02 | 1 | CH_sly_461 | 2 | 2 | 0.000352164 |
Solanum pennellii | Spenn-ch02 | 1 | CH_spe_475 | 2 | 2 | 0.00044479 |
Trifolium pratense | Tp57577_TGAC_v2_LG2 | 1 | CH_tpr_217 | 2 | 2 | 0.0000756974 |
Brassica oleracea | C3 | 2 | CH_bol_301 | 2 | 3 | 0.000196117 |
Durio zibethinus | NW_019168270.1 | 2 | CH_dzi_227 | 2 | 2 | 0.000139047 |
Erigeron canadensis | Conyza_canadensis_scaffold:2 | 2 | CH_eca_68 | 4 | 8 | 0.000000000284558 |
Papaver somniferum | NC_039364.1 | 2 | CH_pso_379 | 3 | 33 | 0.0000165973 |
Solanum lycopersicum | SL4.0ch02 | 2 | CH_sly_461 | 2 | 2 | 0.000352164 |
Solanum pennellii | Spenn-ch02 | 2 | CH_spe_475 | 2 | 2 | 0.00044479 |
Trifolium pratense | Tp57577_TGAC_v2_LG2 | 2 | CH_tpr_217 | 2 | 2 | 0.0000756974 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |