Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.RNA polymerase II-dependent transcription.transcription termination.helicase (SEN1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Capsicum annuum PGAv.1.6.scaffold790 1 CH_can_283 2 2 0.0000826105
Citrullus lanatus CG_Chr09 1 CH_cla_127 2 2 0.0000887115
Durio zibethinus NW_019167982.1 1 CH_dzi_271 2 4 0.00027808
Hydrangea macrophylla Hma1.2p1_0517F.1 1 CH_hma_262 2 2 0.000111086
Petunia axillaris Peaxi162Scf00038 1 CH_pax_208 2 2 0.0000703556
Simmondsia chinensis GWHAASQ00000012 1 CH_sci_92 3 12 0.00000239144
Vigna mungo CM024079.1 1 CH_vmu_266 2 3 0.000193836
Capsicum annuum PGAv.1.6.scaffold790 2 CH_can_283 2 2 0.0000826105
Citrullus lanatus CG_Chr09 2 CH_cla_127 2 2 0.0000887115
Durio zibethinus NW_019167982.1 2 CH_dzi_271 2 4 0.00027808
Hydrangea macrophylla Hma1.2p1_0517F.1 2 CH_hma_262 2 2 0.000111086
Petunia axillaris Peaxi162Scf00038 2 CH_pax_208 2 2 0.0000703556
Simmondsia chinensis GWHAASQ00000012 2 CH_sci_92 3 12 0.00000239144
Vigna mungo CM024079.1 2 CH_vmu_266 2 3 0.000193836

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001