Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.RNA polymerase II-dependent transcription.transcription elongation.SPT6-IWS1 transcription elongation complex.component IWS1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC05 1 CH_bca_1130 2 3 0.000961902
Capsicum annuum PGAv.1.6.scaffold137 1 CH_can_222 3 15 0.0000186155
Carpinus fangiana Cfa05 1 CH_cfa_292 2 2 0.000227204
Durio zibethinus NW_019167871.1 1 CH_dzi_296 3 39 0.000293881
Gossypium hirsutum D10 1 CH_ghi_315 3 5 0.000000898226
Gossypium raimondii Chr11 1 CH_gra_86 4 8 0.000000000485264
Helianthus annuus HanXRQChr17 1 CH_han_564 2 2 0.000231857
Lonicera japonica GWHAAZE00000008 1 CH_lonja_270 3 11 0.00000354925
Physcomitrium patens Chr07 1 CH_ppa_82 2 2 0.0000612726
Phaseolus vulgaris Chr09 1 CH_pvu_343 2 2 0.000220418
Sequoiadendron giganteum chr7 1 CH_sgi_439 3 4 0.000000014239
Theobroma cacao Chromosome_7 1 CH_tca_104 5 36 0.00000000170355
Utricularia gibba unitig_747 1 CH_ugi_141 2 2 0.0000734592
Vigna mungo CM024074.1 1 CH_vmu_332 2 2 0.000387685
Brassica carinata ChrC05 2 CH_bca_1130 2 3 0.000961902
Capsicum annuum PGAv.1.6.scaffold137 2 CH_can_222 3 15 0.0000186155
Carpinus fangiana Cfa05 2 CH_cfa_292 2 2 0.000227204
Durio zibethinus NW_019167871.1 2 CH_dzi_296 3 39 0.000293881
Gossypium hirsutum D10 2 CH_ghi_315 3 5 0.000000898226
Gossypium raimondii Chr11 2 CH_gra_86 4 8 0.000000000485264
Helianthus annuus HanXRQChr17 2 CH_han_564 2 2 0.000231857
Lotus japonicus chr2 2 CH_lja_299 2 3 0.000214516
Lonicera japonica GWHAAZE00000008 2 CH_lonja_270 3 11 0.00000354925
Physcomitrium patens Chr07 2 CH_ppa_82 2 2 0.0000612726
Phaseolus vulgaris Chr09 2 CH_pvu_343 2 2 0.000220418
Sequoiadendron giganteum chr7 2 CH_sgi_439 3 4 0.000000014239
Theobroma cacao Chromosome_7 2 CH_tca_104 5 36 0.00000000170355
Utricularia gibba unitig_747 2 CH_ugi_141 2 2 0.0000734592
Vigna mungo CM024074.1 2 CH_vmu_332 2 2 0.000387685

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001