Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.RNA polymerase II-dependent transcription.transcription elongation.PAF1C transcription initiation and elongation complex.component VIP4/LEO1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Avicennia marina ScioBoG_3703_HRSCAF_3719 1 CH_ama_86 2 2 0.000258665
Lupinus albus Lalb_Chr07 1 CH_lal_258 2 2 0.000157447
Magnolia biondii Chr05 1 CH_mbi_658 2 4 0.000874119
Malus domestica Chr06 1 CH_mdo_197 3 5 0.0000000862768
Medicago truncatula chr3 1 CH_mtr_507 2 2 0.0000410863
Petunia axillaris Peaxi162Scf00201 1 CH_pax_70 3 4 0.0000000296995
Salvia bowleyana GWHASIU00000003 1 CH_sbo_278 2 2 0.000045498
Avicennia marina ScioBoG_3703_HRSCAF_3719 2 CH_ama_86 2 2 0.000258665
Gossypium hirsutum D12 2 CH_ghi_678 2 2 0.000400523
Lupinus albus Lalb_Chr07 2 CH_lal_258 2 2 0.000157447
Magnolia biondii Chr05 2 CH_mbi_658 2 4 0.000874119
Malus domestica Chr06 2 CH_mdo_197 3 5 0.0000000862768
Petunia axillaris Peaxi162Scf00201 2 CH_pax_70 3 4 0.0000000296995
Salvia bowleyana GWHASIU00000003 2 CH_sbo_278 2 2 0.000045498

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001