Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.MEDIATOR complex.regulatory kinase module.component CycC

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_8 1 CH_aly_88 3 4 0.0000000261395
Arabidopsis thaliana Chr5 1 CH_ath_210 2 2 0.0000286492
Brassica carinata ChrC03 1 CH_bca_777 2 2 0.000213764
Brassica carinata ChrB07 1 CH_bca_778 2 2 0.000213764
Brassica oleracea C2 1 CH_bol_266 2 2 0.0000980584
Brassica rapa A02 1 CH_bra_225 2 2 0.000128794
Cardamine hirsuta Chr6 1 CH_chi_211 2 2 0.0000691204
Capsella rubella scaffold_8 1 CH_cru_355 2 2 0.000438693
Capsella rubella scaffold_5 1 CH_cru_356 2 2 0.000438693
Eutrema salsugineum scaffold_6 1 CH_esa_158 2 2 0.0000761499
Quercus lobata CM012294 1 CH_qlo_637 2 2 0.0000516289
Schrenkiella parvula ch2-4 1 CH_spa_160 2 2 0.000078734
Tarenaya hassleriana NW_010966665.1 1 CH_tha_133 2 2 0.000209541
Arabidopsis lyrata scaffold_8 2 CH_aly_88 3 4 0.0000000261395
Arabidopsis thaliana Chr5 2 CH_ath_210 2 2 0.0000286492
Brassica carinata ChrC03 2 CH_bca_777 2 2 0.000213764
Brassica carinata ChrB07 2 CH_bca_778 2 2 0.000213764
Brassica oleracea C2 2 CH_bol_266 2 2 0.0000980584
Brassica rapa A02 2 CH_bra_225 2 2 0.000128794
Cardamine hirsuta Chr6 2 CH_chi_211 2 2 0.0000691204
Capsella rubella scaffold_8 2 CH_cru_355 2 2 0.000438693
Capsella rubella scaffold_5 2 CH_cru_356 2 2 0.000438693
Eutrema salsugineum scaffold_6 2 CH_esa_158 2 2 0.0000761499
Quercus lobata CM012294 2 CH_qlo_637 2 2 0.0000516289
Schrenkiella parvula ch2-4 2 CH_spa_160 2 2 0.000078734
Tarenaya hassleriana NW_010966665.1 2 CH_tha_133 2 2 0.000209541

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001