Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.MEDIATOR complex.tail module.component MED23

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrB07 1 CH_bca_1034 2 3 0.000641272
Carica papaya supercontig_2 1 CH_cpa_75 3 7 0.000000474404
Nicotiana tabacum Nitab4.5_0000018 1 CH_nta_89 2 2 0.000109727
Punica granatum NC_045130.1 1 CH_pgr_193 2 2 0.0000750356
Sequoiadendron giganteum chr1 1 CH_sgi_214 4 4 0.000000000000346852
Sapria himalayana scaffold6_19132642 1 CH_shi_40 3 8 0.0000000980824
Solanum lycopersicum SL4.0ch05 1 CH_sly_300 2 2 0.0000586941
Vigna mungo CM024074.1 1 CH_vmu_70 3 4 0.0000000250499
Brassica carinata ChrB07 2 CH_bca_1034 2 3 0.000641272
Carica papaya supercontig_2 2 CH_cpa_75 3 7 0.000000474404
Eucalyptus grandis Chr02 2 CH_egr_819 2 4 0.000351144
Gossypium hirsutum A03 2 CH_ghi_479 2 2 0.0000801047
Nicotiana tabacum Nitab4.5_0000018 2 CH_nta_89 2 2 0.000109727
Punica granatum NC_045130.1 2 CH_pgr_193 2 2 0.0000750356
Sequoiadendron giganteum chr1 2 CH_sgi_214 4 4 0.000000000000346852
Sapria himalayana scaffold6_19132642 2 CH_shi_40 3 8 0.0000000980824
Solanum lycopersicum SL4.0ch05 2 CH_sly_300 2 2 0.0000586941
Vigna mungo CM024074.1 2 CH_vmu_70 3 4 0.0000000250499

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001